RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 COPB2P35606 906 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 CRKP46108 304 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 ZBED6P86452 979 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 TRIM14Q14142 442 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 TTI2Q6NXR4 508 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 POTEGQ6S5H5 508 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 POTEEQ6S8J3 1075 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 KIAA0895Q8NCT3 520 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 PSMD1Q99460 953 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 PANK4Q9NVE7 773 aa14.75□□□□□ -0.05
USP42-203ENST00000426246 FEZ2Q9UHY8 353 aaPredicted RBP14.75□□□□□ -0.05
USP42-203ENST00000426246 PRPF6O94906 941 aaKnown RBP14.74□□□□□ -0.05
USP42-203ENST00000426246 EEF1GP26641 437 aaKnown RBP14.74□□□□□ -0.05
USP42-203ENST00000426246 NFIAQ12857 509 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 KRT25Q7Z3Z0 450 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 RAB34Q9BZG1 259 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 ARHGAP20Q9P2F6 1191 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 DDX25Q9UHL0 483 aaKnown RBP14.74□□□□□ -0.05
USP42-203ENST00000426246 SPATA20Q8TB22 786 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 GOLGA5Q8TBA6 731 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 PIGOQ8TEQ8 1089 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 UBLCP1Q8WVY7 318 aaPredicted RBP14.74□□□□□ -0.05
USP42-203ENST00000426246 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 EXOC4Q96A65 974 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 FGFBP2Q9BYJ0 223 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 RBM12Q9NTZ6 932 aaKnown RBP14.74□□□□□ -0.05
USP42-203ENST00000426246 CAPN11Q9UMQ6 739 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 PALMO75781 387 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 CFAP58Q5T655 872 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 USP40Q9NVE5 1235 aa14.74□□□□□ -0.05
USP42-203ENST00000426246 HEXIM1O94992 359 aaKnown RBP14.73□□□□□ -0.05
USP42-203ENST00000426246 ADAM9Q13443 819 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 VWA3BQ502W6 1294 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 FAM26FQ5R3K3 315 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ZFYVE27Q5T4F4 411 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 GJB7Q6PEY0 223 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 PHLDB2Q86SQ0 1253 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ZFPM1Q8IX07 1006 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 EHBP1Q8NDI1 1231 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 TNFRSF25Q93038 417 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ZNF287Q9HBT7 754 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ZNF263O14978 683 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 HDLBPQ00341 1268 aaKnown RBP14.73□□□□□ -0.05
USP42-203ENST00000426246 MYOCDQ8IZQ8 938 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
USP42-203ENST00000426246 PSTPIP2Q9H939 334 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 SHTN1A0MZ66 631 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 PBX1P40424 430 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 CARSP49589 748 aaKnown RBP14.73□□□□□ -0.05
USP42-203ENST00000426246 VAV2P52735 878 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 SP4Q02446 784 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 IQCEQ6IPM2 695 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 GIMAP8Q8ND71 665 aaPredicted RBP14.73□□□□□ -0.05
USP42-203ENST00000426246 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 NEDD1Q8NHV4 660 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ARL8AQ96BM9 186 aa14.73□□□□□ -0.05
USP42-203ENST00000426246 ZBTB7AO95365 584 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 SFMBT2Q5VUG0 894 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 NOX5Q96PH1 765 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 OSBPL9Q96SU4 736 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 SALL4Q9UJQ4 1053 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 IGKV6D-41A0A0C4DH26 115 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 LRRN2O75325 713 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 CEP85LQ5SZL2 805 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 FAM71BQ8TC56 605 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 SERPINA10Q9UK55 444 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 EBAG9O00559 213 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 KLRC4O43908 158 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 BUB1BO60566 1050 aaPredicted RBP14.72□□□□□ -0.05
USP42-203ENST00000426246 GCNT3O95395 438 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 MNAT1P51948 309 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 GUCY1A3Q02108 690 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 ADCY1Q08828 1119 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 SLC9C1Q4G0N8 1177 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 GRIPAP1Q4V328 841 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 ARL6IP4Q66PJ3 421 aaKnown RBP14.72□□□□□ -0.05
USP42-203ENST00000426246 MTMR8Q96EF0 704 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 DNAJC18Q9H819 358 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 KCND1Q9NSA2 647 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 FAM198AQ9UFP1 575 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 PCDHA1Q9Y5I3 950 aa14.72□□□□□ -0.05
USP42-203ENST00000426246 EIF3CLB5ME19 914 aaKnown RBP14.71□□□□□ -0.05
USP42-203ENST00000426246 CFBP00751 764 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 CYP2J2P51589 502 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 GRM4Q14833 912 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 SUPT20HQ8NEM7 779 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 EIF3CQ99613 913 aaKnown RBP14.71□□□□□ -0.05
USP42-203ENST00000426246 HPCAL4Q9UM19 191 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 GOLGA6L10A6NI86 522 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 NR2F2P24468 414 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 NBPF9Q3BBW0 867 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 SH3BP5LQ7L8J4 393 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 TPH2Q8IWU9 490 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 TRIM58Q8NG06 486 aa14.71□□□□□ -0.05
USP42-203ENST00000426246 DHTKD1Q96HY7 919 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms