RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TRIM27P14373 513 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 MTHFRP42898 656 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 NPAS4Q8IUM7 802 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
TRIM39-206ENST00000420746 NSUN6Q8TEA1 469 aaKnown RBP10.62□□□□□ -0.71
TRIM39-206ENST00000420746 CASP10Q92851 521 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 STRBPQ96SI9 672 aaKnown RBP10.62□□□□□ -0.71
TRIM39-206ENST00000420746 C16orf70Q9BSU1 422 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 RALYQ9UKM9 306 aaKnown RBP10.62□□□□□ -0.71
TRIM39-206ENST00000420746 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 TTC3P53804 2025 aa10.62□□□□□ -0.71
TRIM39-206ENST00000420746 ASPMQ8IZT6 3477 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 SP9P0CG40 484 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 SMIM10L2AP0DMW4 78 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 SMIM10L2BP0DMW5 78 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 RARSP54136 660 aaKnown RBP10.61□□□□□ -0.71
TRIM39-206ENST00000420746 TBC1D8BQ0IIM8 1120 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 KCNV1Q6PIU1 500 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 STK11IPQ8N1F8 1099 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 RNPEPQ9H4A4 650 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 ERVK-5Q9HDB9 667 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 LIMD1Q9UGP4 676 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 MRVI1Q9Y6F6 885 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
TRIM39-206ENST00000420746 H3BRB1 525 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 SPTLC1O15269 473 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 KINO60870 393 aaKnown RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 STAG3L1P0CL83 205 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 GHRP10912 638 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 NOVP48745 357 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 ADAM17P78536 824 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 TFAP4Q01664 338 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 TDGQ13569 410 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 CCDC96Q2M329 555 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 HSP90AB4PQ58FF6 505 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 MYSM1Q5VVJ2 828 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 FAM43BQ6ZT52 329 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 SIX5Q8N196 739 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 FTHL17Q9BXU8 183 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
TRIM39-206ENST00000420746 CYP26B1Q9NR63 512 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 NCDNQ9UBB6 729 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 STX8Q9UNK0 236 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 FANCMQ8IYD8 2048 aa10.6□□□□□ -0.71
TRIM39-206ENST00000420746 KIAA1671Q9BY89 1806 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 CHRNA1P02708 482 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 ARP10275 920 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 GNAT2P19087 354 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 ERVFC1P60507 584 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 MGAT3Q09327 533 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 LPIN1Q14693 890 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 HSDL1Q3SXM5 330 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 KIAA1841Q6NSI8 718 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 TAF2Q6P1X5 1199 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 CLASRPQ8N2M8 674 aaKnown RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 APOL5Q9BWW9 433 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 EPB41L4AQ9HCS5 686 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 NGRNQ9NPE2 291 aaKnown RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 WNT16Q9UBV4 365 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 FBXL21Q9UKT6 434 aa10.59□□□□□ -0.71
TRIM39-206ENST00000420746 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 SETXQ7Z333 2677 aaKnown RBP10.59□□□□□ -0.71
TRIM39-206ENST00000420746 SPEGQ15772 3267 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 MYO10Q9HD67 2058 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 PLXNA4Q9HCM2 1894 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 DCDC2BA2VCK2 349 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 FGF18O76093 207 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 EOMESO95936 686 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 CHGBP05060 677 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 SLC3A2P08195 630 aaKnown RBP10.58□□□□□ -0.72
TRIM39-206ENST00000420746 ATP5JP18859 108 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 SLC16A2P36021 539 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 TDO2P48775 406 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 ZNF528Q3MIS6 628 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 RUFY4Q6ZNE9 571 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 C1orf210Q8IVY1 113 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 RIN2Q8WYP3 895 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-206ENST00000420746 RMDN3Q96TC7 470 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 IL1RAPL2Q9NP60 686 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 EXOC6BQ9Y2D4 811 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 SQORQ9Y6N5 450 aa10.58□□□□□ -0.72
TRIM39-206ENST00000420746 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms