RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLITRK3O94933 977 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 NDUFA10O95299 355 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 FOSP01100 380 aaPredicted RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 ITGB5P18084 799 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 RPA1P27694 616 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 HOXD13P35453 343 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 ARHGAP25P42331 645 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 CBX1P83916 185 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 PLS1Q14651 629 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 GRIPAP1Q4V328 841 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 HYIQ5T013 277 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 FBXO38Q6PIJ6 1188 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 TMTC1Q8IUR5 882 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 SLC35F6Q8N357 371 aa9.76□□□□□ -0.85
SNCA-206ENST00000420646 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
SNCA-206ENST00000420646 PHLPP2Q6ZVD8 1323 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 CLIC2O15247 247 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 CCP110O43303 1012 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 TGFB2P61812 414 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ZC2HC1CQ53FD0 456 aaPredicted RBP9.75□□□□□ -0.85
SNCA-206ENST00000420646 LACRTQ9GZZ8 138 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ZNF541Q9H0D2 1346 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
SNCA-206ENST00000420646 CIITAP33076 1130 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ARID5AQ03989 594 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 KIF4BQ2VIQ3 1234 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ZCWPW2Q504Y3 356 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 CEP55Q53EZ4 464 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 HAUS3Q68CZ6 603 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 CCDC65Q8IXS2 484 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ERO1AQ96HE7 468 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 DNAJC7Q99615 494 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 ZNF577Q9BSK1 485 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 HDAC6Q9UBN7 1215 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 RIPK3Q9Y572 518 aa9.75□□□□□ -0.85
SNCA-206ENST00000420646 A0A1W2PQC6 194 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 PIK3CDO00329 1044 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 TBC1D12O60347 775 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 GAS7O60861 476 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 NMT1P30419 496 aaKnown RBP9.74□□□□□ -0.85
SNCA-206ENST00000420646 HERVK_113P62684 666 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 ADAM9Q13443 819 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 ANGEL2Q5VTE6 544 aaKnown RBP9.74□□□□□ -0.85
SNCA-206ENST00000420646 RRAGAQ7L523 313 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 MTMR14Q8NCE2 650 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
SNCA-206ENST00000420646 UNC45AQ9H3U1 944 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 NHEJ1Q9H9Q4 299 aaPredicted RBP9.74□□□□□ -0.85
SNCA-206ENST00000420646 ZNF263O14978 683 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 PSMD10O75832 226 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 PTGER2P43116 358 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 CASP4P49662 377 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 FKBP15Q5T1M5 1219 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 DNAAF5Q86Y56 855 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 ANKRD13CQ8N6S4 541 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
SNCA-206ENST00000420646 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 FAM20AQ96MK3 541 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 HSD17B14Q9BPX1 270 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 KCTD10Q9H3F6 313 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 SIK3Q9Y2K2 1263 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 RABGAP1Q9Y3P9 1069 aa9.74□□□□□ -0.85
SNCA-206ENST00000420646 KIF5CO60282 957 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 GCNT3O95395 438 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 VCAM1P19320 739 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 FKBP3Q00688 224 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 COG2Q14746 738 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 TNIP1Q15025 636 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 FKBP1CQ5VVH2 108 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 FAM114A1Q8IWE2 563 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 CLEC4DQ8WXI8 215 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 CCDC51Q96ER9 411 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MTFR1LQ9H019 292 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MRPL11Q9Y3B7 192 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 TELO2Q9Y4R8 837 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MACROD2A1Z1Q3 448 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 LRRC53A6NM62 1247 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 IPO5O00410 1097 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 SRGAP2O75044 1071 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MYCLP12524 364 aaPredicted RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 ACTN1P12814 892 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 FECHP22830 423 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 NR2F2P24468 414 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 LRRC63Q05C16 580 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MAN2A1Q16706 1144 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 RINT1Q6NUQ1 792 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MOXD1Q6UVY6 613 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 NSMFQ6X4W1 530 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 PRPF38AQ8NAV1 312 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 TAAR1Q96RJ0 339 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 NAP1L4Q99733 375 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms