RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 RNF216Q9NWF9 866 aaPredicted RBP15.31■□□□□ 0.04
LINC00940-201ENST00000418006 SHOX2O60902 331 aaPredicted RBP15.31■□□□□ 0.04
LINC00940-201ENST00000418006 DDNO94850 711 aaPredicted RBP15.31■□□□□ 0.04
LINC00940-201ENST00000418006 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
LINC00940-201ENST00000418006 MMP14P50281 582 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 USP11P51784 963 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 ERVK-24P63145 666 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 SPP2Q13103 211 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 SPATA1Q5VX52 437 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 SLC30A10Q6XR72 485 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 KCNK18Q7Z418 384 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
LINC00940-201ENST00000418006 GPRC5DQ9NZD1 345 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 FEM1BQ9UK73 627 aa15.31■□□□□ 0.04
LINC00940-201ENST00000418006 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
LINC00940-201ENST00000418006 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
LINC00940-201ENST00000418006 LIG3P49916 1009 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 PDE4DQ08499 809 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 STIM1Q13586 685 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 PDIA5Q14554 519 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 TMTC1Q8IUR5 882 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 TRIM9Q9C026 710 aa15.3■□□□□ 0.04
LINC00940-201ENST00000418006 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 KLRC4O43908 158 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 GGCXP38435 758 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
LINC00940-201ENST00000418006 PAK1Q13153 545 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 MAP9Q49MG5 647 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 FAM160B2Q86V87 743 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 COG1Q8WTW3 980 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
LINC00940-201ENST00000418006 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 CCPG1Q9ULG6 757 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 GCOM1H8Y6P7 765 aaPredicted RBP15.29■□□□□ 0.04
LINC00940-201ENST00000418006 FLOT1O75955 427 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 POLR2MP0CAP2 368 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 FCER1AP12319 257 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 CCT5P48643 541 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 GSCP56915 257 aaPredicted RBP15.29■□□□□ 0.04
LINC00940-201ENST00000418006 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 EXOC1Q9NV70 894 aa15.29■□□□□ 0.04
LINC00940-201ENST00000418006 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
LINC00940-201ENST00000418006 IDEP14735 1019 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 MCM3P25205 808 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 SREBF1P36956 1147 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 AMPD3Q01432 767 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 FILIP1LQ4L180 1135 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 GPC2Q8N158 579 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 CTAGE1Q96RT6 745 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 NAP1L4Q99733 375 aaKnown RBP15.28■□□□□ 0.04
LINC00940-201ENST00000418006 CUEDC2Q9H467 287 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 RAVER2Q9HCJ3 691 aaKnown RBP15.28■□□□□ 0.04
LINC00940-201ENST00000418006 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 FAM169AQ9Y6X4 670 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 DCAF15Q66K64 600 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 SLF1Q9BQI6 1058 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 KCNMB3Q9NPA1 279 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 RNF181Q9P0P0 153 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
LINC00940-201ENST00000418006 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 ITIH6Q6UXX5 1313 aa15.28■□□□□ 0.04
LINC00940-201ENST00000418006 POTEB3A0JP26 581 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 MYMKA6NI61 221 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 POTECB2RU33 542 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 E9PMD0 336 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 ALAS1P13196 640 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 VCAM1P19320 739 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
LINC00940-201ENST00000418006 PSEN1P49768 467 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 IRAK1P51617 712 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 PMS1P54277 932 aaKnown RBP15.27■□□□□ 0.04
LINC00940-201ENST00000418006 POTEBQ6S5H4 581 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.04
LINC00940-201ENST00000418006 FAM76AQ8TAV0 307 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 RPAP3Q9H6T3 665 aaPredicted RBP15.27■□□□□ 0.04
LINC00940-201ENST00000418006 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 PICK1Q9NRD5 415 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
LINC00940-201ENST00000418006 ATAD5Q96QE3 1844 aa15.27■□□□□ 0.04
LINC00940-201ENST00000418006 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.03
LINC00940-201ENST00000418006 AGPSO00116 658 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 MEIS1O00470 390 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 EBAG9O00559 213 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 STK4Q13043 487 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.03
LINC00940-201ENST00000418006 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.03
LINC00940-201ENST00000418006 CRYGNQ8WXF5 182 aa15.27■□□□□ 0.03
LINC00940-201ENST00000418006 RAD54LQ92698 747 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms