RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 RNF40O75150 1001 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CDC45O75419 566 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 GJB5O95377 273 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 GH1P01241 217 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CXCL10P02778 98 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF286BP0CG31 522 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 SNHG28P0DPA3 235 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CKBP12277 381 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 MBTPS1Q14703 1052 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 IMMTQ16891 758 aaKnown RBP9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 LY6KQ17RY6 165 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 FAM117BQ6P1L5 589 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 SEPT14Q6ZU15 432 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CHST3Q7LGC8 479 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 TBC1D10CQ8IV04 446 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 TGS1Q96RS0 853 aaKnown RBP9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 RNF41Q9H4P4 317 aaPredicted RBP9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 TCP11L1Q9NUJ3 509 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 GTF2IRD1Q9UHL9 959 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 CTNNA3Q9UI47 895 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 COL4A6Q14031 1691 aa9.61□□□□□ -0.87
UPF3AP1-201ENST00000413731 NEDD4P46934 1319 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 PI4K2BG5E9Z4 385 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 SGSM2O43147 1006 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 ATP9BO43861 1147 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 CFHP08603 1231 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 IL9P15248 144 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 KCNA5P22460 613 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 ERVK-21P61565 698 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 CDC37Q16543 378 aaPredicted RBP9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 TRIM71Q2Q1W2 868 aaKnown RBP9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 MFSD6Q6ZSS7 791 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 TBC1D5Q92609 795 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 TAAR1Q96RJ0 339 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 C17orf80Q9BSJ5 609 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 ALG1Q9BT22 464 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 ANO2Q9NQ90 1003 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 LMCD1Q9NZU5 365 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 HDAC6Q9UBN7 1215 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
UPF3AP1-201ENST00000413731 LOXHD1Q8IVV2 1947 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ABHD14A-ACY1A0A1B0GW23 586 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 B4DLN1 442 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 F2P00734 622 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 PCP11498 1178 aaKnown RBP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 PSEN2P49810 448 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF200P98182 395 aaPredicted RBP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 LEXMQ3ZCV2 418 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZNF618Q5T7W0 954 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 GJD3Q8N144 294 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 SYTL5Q8TDW5 730 aaPredicted RBP9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ESR2Q92731 530 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 RAD9AQ99638 391 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ZKSCAN3Q9BRR0 538 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 UBA5Q9GZZ9 404 aa9.59□□□□□ -0.87
UPF3AP1-201ENST00000413731 ABCB11O95342 1321 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 HAS3O00219 553 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 SORBS3O60504 671 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 CASTP20810 708 aaKnown RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 PTH1RQ03431 593 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 PTK7Q13308 1070 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 DGKDQ16760 1214 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 KIAA0753Q2KHM9 967 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 GPATCH4Q5T3I0 446 aaKnown RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 MYOCDQ8IZQ8 938 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 NSUN6Q8TEA1 469 aaKnown RBP9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 KATNAL1Q9BW62 490 aa9.58□□□□□ -0.88
UPF3AP1-201ENST00000413731 TECTAO75443 2155 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 PRR33A8MZF0 331 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 H3BQ06 376 aaPredicted RBP9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 EFCAB14O75071 495 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 LGR5O75473 907 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 TRDNQ13061 729 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 IKBKEQ14164 716 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 STXBP2Q15833 593 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 QRICH1Q2TAL8 776 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 RALYLQ86SE5 291 aaKnown RBP9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 ALYREFQ86V81 257 aaKnown RBP9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 PPTC7Q8NI37 304 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 RMDN3Q96TC7 470 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 CNNM2Q9H8M5 875 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 DDX41Q9UJV9 622 aaKnown RBP9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 MRVI1Q9Y6F6 885 aa9.57□□□□□ -0.88
UPF3AP1-201ENST00000413731 KMT2EQ8IZD2 1858 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms