RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FANCCQ00597 558 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SPATA1Q5VX52 437 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 AGTPBP1Q9UPW5 1226 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 RGS2P41220 211 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ZNF658Q5TYW1 1059 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ARMCX5Q6P1M9 558 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ANKRD13CQ8N6S4 541 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 RDM1Q8NG50 284 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 CHAMP1Q96JM3 812 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ZDHHC9Q9Y397 364 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 PVALEFA0A1B0GWK0 134 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 PDHXO00330 501 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 XRCC5P13010 732 aaKnown RBP9.37□□□□□ -0.91
SYNE1-211ENST00000413186 LEKR1Q6ZMV7 388 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 PAGE5Q96GU1 130 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 DDX23Q9BUQ8 820 aaKnown RBP9.37□□□□□ -0.91
SYNE1-211ENST00000413186 VPS16Q9H269 839 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 VWA5AO00534 786 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SMAP1Q8IYB5 467 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ZFYVE1Q9HBF4 777 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 ATP6V0A4Q9HBG4 840 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 SEL1LQ9UBV2 794 aa9.37□□□□□ -0.91
SYNE1-211ENST00000413186 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 PLA2G6O60733 806 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ERCC3P19447 782 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ZNF75DP51815 510 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 YARSP54577 528 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SEPT1Q8WYJ6 367 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 GMLQ99445 158 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ATRNL1Q5VV63 1379 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 GH1P01241 217 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 MORC3Q14149 939 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 TMCO3Q6UWJ1 677 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 UNC13DQ70J99 1090 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 CCDC97Q96F63 343 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 DYDC2Q96IM9 177 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 CCDC42Q96M95 316 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 TIPINQ9BVW5 301 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 GABBR1Q9UBS5 961 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 TJP1Q07157 1748 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 INO80B-WBP1J3KQ70 363 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SREBF1P36956 1147 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 KRT83P78385 493 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 DNERQ8NFT8 737 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 RAD54LQ92698 747 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 UBR2Q8IWV8 1755 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 GGPS1O95749 300 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 TUBBP07437 444 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 MYL3P08590 195 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 YY1P25490 414 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 CYP2J2P51589 502 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SH3BGRP55822 239 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 FKBP3Q00688 224 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ADAM9Q13443 819 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 SWSAP1Q6NVH7 229 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
SYNE1-211ENST00000413186 ZFP91Q96JP5 570 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 EIF2AK1Q9BQI3 630 aaKnown RBP9.36□□□□□ -0.91
SYNE1-211ENST00000413186 P4HA1P13674 534 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 EZRP15311 586 aaKnown RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 TNNI1P19237 187 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 YWHAEP62258 255 aaKnown RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 TUBB2AQ13885 445 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 CATSPERGQ6ZRH7 1159 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 LXNQ9BS40 222 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 TUBB2BQ9BVA1 445 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 SYNCQ9H7C4 482 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 FBXO2Q9UK22 296 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 CYP2B6P20813 491 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 NOGQ13253 232 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 XKR3Q5GH77 459 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 CCDC91Q7Z6B0 441 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-211ENST00000413186 IGSF22Q8N9C0 903 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 POMGNT1Q8WZA1 660 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 P2RX5Q93086 422 aa9.35□□□□□ -0.91
SYNE1-211ENST00000413186 TAAR1Q96RJ0 339 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms