RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 PNMA3Q9UL41 463 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 GDAQ9Y2T3 454 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 NFASCO94856 1347 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 EYA4O95677 639 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 CYP11B2P19099 503 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 PRCPP42785 496 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 SPATA1Q5VX52 437 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 SPRYD7Q5W111 196 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 CHADLQ6NUI6 762 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 SMYD4Q8IYR2 804 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 FAM133AQ8N9E0 248 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 DDX12PQ92771 950 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 CCDC47Q96A33 483 aaKnown RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 SENP7Q9BQF6 1050 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 RNF216Q9NWF9 866 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 DNAJC25-GNG10A0A024R161 153 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 TESPA1A2RU30 521 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 CLGNO14967 610 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 PEX10O60683 326 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 LYPLA2O95372 231 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 MYCLP12524 364 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 ICAM3P32942 547 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 ALDH5A1P51649 535 aaPredicted RBP6.16□□□□□ -1.42
EPHA4-202ENST00000409854 PSMC6P62333 389 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 PDE4DQ08499 809 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 PSMD2Q13200 908 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 ARSHQ5FYA8 562 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 FOXR2Q6PJQ5 311 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 KIAA0895Q8NCT3 520 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 RDM1Q8NG50 284 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 BRI3BPQ8WY22 251 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 EXOC1Q9NV70 894 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 FANCLQ9NW38 375 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 NFE2L3Q9Y4A8 694 aa6.16□□□□□ -1.42
EPHA4-202ENST00000409854 SRCAPQ6ZRS2 3230 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 KCNA2P16389 499 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 ERCC3P19447 782 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 PAK1Q13153 545 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
EPHA4-202ENST00000409854 Q3C1V9 767 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 TRMT44Q8IYL2 757 aaKnown RBP6.15□□□□□ -1.42
EPHA4-202ENST00000409854 DHTKD1Q96HY7 919 aaPredicted RBP6.15□□□□□ -1.42
EPHA4-202ENST00000409854 FGD4Q96M96 766 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 TRIM5Q9C035 493 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 MROH8Q9H579 483 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 RGL1Q9NZL6 768 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 MORF4L1Q9UBU8 362 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 DNM3Q9UQ16 869 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 CTNND2Q9UQB3 1225 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 PCDHA2Q9Y5H9 948 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 PASKQ96RG2 1323 aa6.15□□□□□ -1.42
EPHA4-202ENST00000409854 SOWAHBA6NEL2 793 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 SPATA31C2B4DYI2 1134 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ATP9AO75110 1047 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ATP1A3P13637 1013 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 SFNP31947 248 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ERVK-9P63128 1117 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ERVK-24P63145 666 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 KRT76Q01546 638 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 STK4Q13043 487 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 COASYQ13057 564 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF746Q6NUN9 644 aaPredicted RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 GPBP1Q86WP2 473 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ANKRD35Q8N283 1001 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 MORC4Q8TE76 937 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 NELFBQ8WX92 580 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CDHR1Q96JP9 859 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 PAGR1Q9BTK6 254 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 R3HDMLQ9H3Y0 253 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 WRAP73Q9P2S5 460 aaPredicted RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CCL15-CCL14A0A0B4J2E2 113 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 PDHXO00330 501 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CHMP2AO43633 222 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 EIF3JO75822 258 aaKnown RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 FCER1AP12319 257 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 JAK3P52333 1124 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 FANCCQ00597 558 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CNTN2Q02246 1040 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CYP4A11Q02928 519 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 GIT2Q14161 759 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CTTNQ14247 550 aaKnown RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 CCL15Q16663 113 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 DYMQ7RTS9 669 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 APTXQ7Z2E3 356 aaKnown RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 MIER3Q7Z3K6 550 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 NCAPG2Q86XI2 1143 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 MAP7D2Q96T17 732 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 KCND2Q9NZV8 630 aa6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ADD3Q9UEY8 706 aaKnown RBP6.15□□□□□ -1.43
EPHA4-202ENST00000409854 ADGRA2Q96PE1 1338 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 CCNE2O96020 404 aa6.14□□□□□ -1.43
EPHA4-202ENST00000409854 P4HBP07237 508 aaKnown RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 GCLCP48506 637 aaPredicted RBP6.14□□□□□ -1.43
EPHA4-202ENST00000409854 PLCB2Q00722 1185 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms