RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 STK4Q13043 487 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 FUKQ8N0W3 1084 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
LIMS2-205ENST00000409455 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
LIMS2-205ENST00000409455 SLC1A4P43007 532 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 TNNC1P63316 161 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 PLCB1Q9NQ66 1216 aa16.97■□□□□ 0.31
LIMS2-205ENST00000409455 GAKO14976 1311 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 CCDC194A0A1B0GVG4 234 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 ORC4O43929 436 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
LIMS2-205ENST00000409455 RHBDL3P58872 404 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 HLTFQ14527 1009 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIMS2-205ENST00000409455 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
LIMS2-205ENST00000409455 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
LIMS2-205ENST00000409455 ANKRD20A8PQ5CZ79 823 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 FAM47AQ5JRC9 791 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 PODNQ7Z5L7 613 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 TRIM9Q9C026 710 aa16.96■□□□□ 0.31
LIMS2-205ENST00000409455 BAZ2BQ9UIF8 2168 aaKnown RBP16.96■□□□□ 0.31
LIMS2-205ENST00000409455 SSU72P8A0A1W2PR75 194 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 ADAMTS3O15072 1205 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 TRAPPC3O43617 180 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.3
LIMS2-205ENST00000409455 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.3
LIMS2-205ENST00000409455 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.3
LIMS2-205ENST00000409455 IFFO1Q0D2I5 559 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 GPIHBP1Q8IV16 184 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 TEX11Q8IYF3 940 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 DYNLL2Q96FJ2 89 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 TAF1DQ9H5J8 278 aaPredicted RBP16.96■□□□□ 0.3
LIMS2-205ENST00000409455 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.3
LIMS2-205ENST00000409455 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.3
LIMS2-205ENST00000409455 PALMO75781 387 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 PDHBP11177 359 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 FCER1AP12319 257 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 SLC8A1P32418 973 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 BIRC3Q13489 604 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 MAN2A1Q16706 1144 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 EP400NLQ6ZTU2 488 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 OSBPL7Q9BZF2 842 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 HAUS2Q9NVX0 235 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 PCDHA4Q9UN74 947 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.3
LIMS2-205ENST00000409455 NMT2O60551 498 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 PLCG1P19174 1290 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 ODF2Q5BJF6 829 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 RUFY4Q6ZNE9 571 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 CACNA2D3Q8IZS8 1091 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 LRRC45Q96CN5 670 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
LIMS2-205ENST00000409455 LAD1O00515 517 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 RAD51CO43502 376 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 FTCDO95954 541 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 PLCG2P16885 1265 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 SCNN1DP51172 638 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 EIF1ADQ8N9N8 165 aaKnown RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 BAP1Q92560 729 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 P3H4Q92791 437 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 TMEM60Q9H2L4 133 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 SLC12A6Q9UHW9 1150 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 QSER1Q2KHR3 1735 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 FGFR1OPO95684 399 aaKnown RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 VEGFAP15692 232 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 CTNNA1P35221 906 aaKnown RBP16.94■□□□□ 0.3
LIMS2-205ENST00000409455 HSD17B3P37058 310 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 AMPD3Q01432 767 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 CABP7Q86V35 215 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 RASGRP4Q8TDF6 673 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 SEC16BQ96JE7 1060 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 ISCUQ9H1K1 167 aa16.94■□□□□ 0.3
LIMS2-205ENST00000409455 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 RBAK-RBAKDNI3L0D1 243 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 DNM1LO00429 736 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 KIF5BP33176 963 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 CUL1Q13616 776 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 CRYMQ14894 314 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 TRADDQ15628 312 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 AOC3Q16853 763 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 SLC9C1Q4G0N8 1177 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 TAX1BP1Q86VP1 789 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 INPP4AQ96PE3 977 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-205ENST00000409455 C7orf25Q9BPX7 421 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
LIMS2-205ENST00000409455 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 ABCB11O95342 1321 aa16.93■□□□□ 0.3
LIMS2-205ENST00000409455 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms