RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 QPCTQ16769 361 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
PTPRN-202ENST00000409251 SEPT11Q9NVA2 429 aaKnown RBP14.22□□□□□ -0.13
PTPRN-202ENST00000409251 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 SLC1A4P43007 532 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 CFAP221Q4G0U5 840 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 ZBTB10Q96DT7 871 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 FOXP1Q9H334 677 aaPredicted RBP14.22□□□□□ -0.13
PTPRN-202ENST00000409251 TPX2Q9ULW0 747 aaKnown RBP14.22□□□□□ -0.13
PTPRN-202ENST00000409251 CNTNAP5Q8WYK1 1306 aa14.22□□□□□ -0.13
PTPRN-202ENST00000409251 MYH10P35580 1976 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 DDTLA6NHG4 134 aaPredicted RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 HAUS3Q68CZ6 603 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 CREG2Q8IUH2 290 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 CDAN1Q8IWY9 1227 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 FBXL16Q8N461 479 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 AENQ8WTP8 325 aaKnown RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 CCDC47Q96A33 483 aaKnown RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 MYH7P12883 1935 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 IL1R1P14778 569 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 MDH1P40925 334 aaKnown RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 MAGOHP61326 146 aaKnown RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 ARMC3Q5W041 872 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 MAGOHBQ96A72 148 aaKnown RBP14.21□□□□□ -0.13
PTPRN-202ENST00000409251 RPGRIP1Q96KN7 1286 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 COA1Q9GZY4 146 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 RWDD2AQ9UIY3 292 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 WDR19Q8NEZ3 1342 aa14.21□□□□□ -0.13
PTPRN-202ENST00000409251 LGALS16A8MUM7 142 aa14.21□□□□□ -0.14
PTPRN-202ENST00000409251 CTNND1O60716 968 aaKnown RBP14.21□□□□□ -0.14
PTPRN-202ENST00000409251 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.14
PTPRN-202ENST00000409251 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.14
PTPRN-202ENST00000409251 CHADLQ6NUI6 762 aa14.21□□□□□ -0.14
PTPRN-202ENST00000409251 CCDC25Q86WR0 208 aa14.21□□□□□ -0.14
PTPRN-202ENST00000409251 KIF2BQ8N4N8 673 aa14.21□□□□□ -0.14
PTPRN-202ENST00000409251 IRS2Q9Y4H2 1338 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 PBX1P40424 430 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 UBE2SQ16763 222 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 USH1GQ495M9 461 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 DDX47Q9H0S4 455 aaKnown RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 SERPINB13Q9UIV8 391 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 ATP8A1Q9Y2Q0 1164 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 EPHB6O15197 1021 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 PALMO75781 387 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 DHX9Q08211 1270 aaKnown RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 FUT2Q10981 343 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 LRRC53A6NM62 1247 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 PRPF3O43395 683 aaKnown RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 ORC4O43929 436 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 TNNI2P48788 182 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 DNM2P50570 870 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 ZNF658Q5TYW1 1059 aaPredicted RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 PAPD7Q5XG87 772 aaKnown RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 TBC1D22AQ8WUA7 517 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 NSMCE1Q8WV22 266 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 HVCN1Q96D96 273 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 NOX5Q96PH1 765 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 RMND1Q9NWS8 449 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
PTPRN-202ENST00000409251 MAD2L2Q9UI95 211 aa14.2□□□□□ -0.14
PTPRN-202ENST00000409251 ZC3H4Q9UPT8 1303 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 TARSL2A2RTX5 802 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 H7C1D1 291 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 DNM1LO00429 736 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 PLSCR1O15162 318 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 COPB2P35606 906 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 ZKSCAN8Q15776 578 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 PRMT6Q96LA8 375 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 LIMA1Q9UHB6 759 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 FZD1Q9UP38 647 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 DCDC2CA8MYV0 355 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 ZNF263O14978 683 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 KIAA0753Q2KHM9 967 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 CCDC38Q502W7 563 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 GKAP1Q5VSY0 366 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 PRAMEF18Q5VWM3 479 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 ATP6V1G3Q96LB4 118 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 MTRQ99707 1265 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 ELAC2Q9BQ52 826 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 ADAMTS1Q9UHI8 967 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 CCNT1O60563 726 aaKnown RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 SATB1Q01826 763 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
PTPRN-202ENST00000409251 EMBQ6PCB8 327 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 DTHD1Q6ZMT9 781 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 SALL4Q9UJQ4 1053 aa14.19□□□□□ -0.14
PTPRN-202ENST00000409251 GMNCA6NCL1 334 aa14.18□□□□□ -0.14
PTPRN-202ENST00000409251 KIF1CO43896 1103 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms