RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PDS5AQ29RF7 1337 aaKnown RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 CAMTA1Q9Y6Y1 1673 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 GCOM1H8Y6P7 765 aaPredicted RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 MYZAPP0CAP1 466 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 MYBP10242 640 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 MAGOHP61326 146 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 MESDQ14696 234 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 MEX3CQ5U5Q3 659 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 C12orf60Q5U649 245 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 FAM196AQ6ZSG2 479 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 CREG2Q8IUH2 290 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 MAGOHBQ96A72 148 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 BRIP1Q9BX63 1249 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 OSGEPQ9NPF4 335 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 ATP8A2Q9NTI2 1148 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 FAM53CQ9NYF3 392 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 CTTNBP2NLQ9P2B4 639 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 FBXL5Q9UKA1 691 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 COL4A3BPQ9Y5P4 624 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 AGPSO00116 658 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 SKAP2O75563 359 aaPredicted RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 FGGP02679 453 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 NMT1P30419 496 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 FLT3P36888 993 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 KCNJ1P48048 391 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 CASP5P51878 434 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 EPHB4P54760 987 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 EPC2Q52LR7 807 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 ZNF804AQ7Z570 1209 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 DHTKD1Q96HY7 919 aaPredicted RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 NUP58Q9BVL2 599 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 BSDC1Q9NW68 430 aaPredicted RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 MKRN1Q9UHC7 482 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 HDAC9Q9UKV0 1011 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 RAB21Q9UL25 225 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNX13-201ENST00000409076 USTQ9Y2C2 406 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 PSMD14O00487 310 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 EVI5O60447 810 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 FAM13AO94988 1023 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 NF2P35240 595 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 TNNC1P63316 161 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 NAA25Q14CX7 972 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 PPP1R7Q15435 360 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
SNX13-201ENST00000409076 GBP6Q6ZN66 633 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 CCDC65Q8IXS2 484 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 KAT2BQ92831 832 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
SNX13-201ENST00000409076 RASSF10A6NK89 507 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TCP1P17987 556 aaKnown RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 MIIPQ5JXC2 388 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 ALKBH5Q6P6C2 394 aaKnown RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 TSGA10Q9BZW7 698 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 HAUS2Q9NVX0 235 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 GCNT4Q9P109 453 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 MYH15Q9Y2K3 1946 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 OPLAHO14841 1288 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 RHOBTB3O94955 611 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 ACSL3O95573 720 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 FGFR4P22455 802 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 PEX19P40855 299 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 MAP2K1Q02750 393 aaPredicted RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 PTK2Q05397 1052 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 COG2Q14746 738 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TLR10Q9BXR5 811 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 CLRN2A0PK11 232 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TISP43B9A030 160 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 PIAS1O75925 651 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 UPP2O95045 317 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 LDHCP07864 332 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 EXOC3L4Q17RC7 722 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 DAB2IPQ5VWQ8 1189 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 PDXDC1Q6P996 788 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TBC1D1Q86TI0 1168 aaPredicted RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 KCNV2Q8TDN2 545 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 TNFRSF25Q93038 417 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 DNAJC7Q99615 494 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 PYM1Q9BRP8 204 aaKnown RBP9.11□□□□□ -0.95
SNX13-201ENST00000409076 VEZTQ9HBM0 779 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 PLCB1Q9NQ66 1216 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 SERPINA10Q9UK55 444 aa9.11□□□□□ -0.95
SNX13-201ENST00000409076 ABCC6O95255 1503 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 FAM237AA0A1B0GTK4 181 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 ERVV-1B6SEH8 477 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 PDHBP11177 359 aa9.1□□□□□ -0.95
SNX13-201ENST00000409076 NEFHP12036 1026 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms