RNA–Protein interactions for RNA: ENST00000407008.7

NLK-201, Transcript of nemo like kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLK, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-201ENST00000407008 RDM1Q8NG50 284 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 UBXN4Q92575 508 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 GLG1Q92896 1179 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 VTI1AQ96AJ9 217 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 FUCA2Q9BTY2 467 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.12□□□□□ -0.95
NLK-201ENST00000407008 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 BHMT2Q9H2M3 363 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 FEZ2Q9UHY8 353 aaPredicted RBP9.12□□□□□ -0.95
NLK-201ENST00000407008 COL2A1P02458 1487 aaPredicted RBP9.12□□□□□ -0.95
NLK-201ENST00000407008 K7ENM7 598 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 LRRC8AQ8IWT6 810 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 FAM167AQ96KS9 214 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 CEP63Q96MT8 703 aa9.12□□□□□ -0.95
NLK-201ENST00000407008 FHDC1Q9C0D6 1143 aaPredicted RBP9.12□□□□□ -0.95
NLK-201ENST00000407008 PHLPP2Q6ZVD8 1323 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 PITPNM2Q9BZ72 1349 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 QARSP47897 775 aaKnown RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 ADAM9Q13443 819 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 SNAPC2Q13487 334 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 NEDD9Q14511 834 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 MCPH1Q8NEM0 835 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 RGS17Q9UGC6 210 aaPredicted RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 TACC3Q9Y6A5 838 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 TAF1LQ8IZX4 1826 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 PP2D1A8MPX8 630 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 POTECB2RU33 542 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 TACC1O75410 805 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 RPA1P27694 616 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 INPP5BP32019 993 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 EPHX2P34913 555 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 TUBB2AQ13885 445 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 SLC9C1Q4G0N8 1177 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 Q4G0T1 1027 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 NAALADL2Q58DX5 795 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 ZBTB8OSQ8IWT0 167 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 DEPTORQ8TB45 409 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 FNBP1Q96RU3 617 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 MXRA8Q9BRK3 442 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 TUBB2BQ9BVA1 445 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 MAF1Q9H063 256 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 BAZ2AQ9UIF9 1905 aaKnown RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 MYPNQ86TC9 1320 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 CXCL11O14625 94 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 PHACTR2O75167 634 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 ERLIN1O75477 346 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 VCAM1P19320 739 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 POLGP54098 1239 aaPredicted RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 SMYD4Q8IYR2 804 aaPredicted RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 ACCSQ96QU6 501 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 POLR3CQ9BUI4 534 aaPredicted RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 RANBP17Q9H2T7 1088 aaKnown RBP9.11□□□□□ -0.95
NLK-201ENST00000407008 SNED1Q8TER0 1413 aa9.11□□□□□ -0.95
NLK-201ENST00000407008 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
NLK-201ENST00000407008 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 PSMC5P62195 406 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 DHX40Q8IX18 779 aaKnown RBP9.1□□□□□ -0.95
NLK-201ENST00000407008 GMLQ99445 158 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 ELP3Q9H9T3 547 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 GDAQ9Y2T3 454 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 SBF2Q86WG5 1849 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 NFKBIEO00221 500 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 CETN2P41208 172 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 EVX2Q03828 476 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 DPP9Q86TI2 863 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 UPF1Q92900 1129 aaKnown RBP eCLIP9.1□□□□□ -0.95
NLK-201ENST00000407008 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 GBP3Q9H0R5 595 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 CASZ1Q86V15 1759 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 NR2F2P24468 414 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 MCM3P25205 808 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 PRCPP42785 496 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 COASYQ13057 564 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 TCP11X2Q5H9J9 407 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 LMBR1Q8WVP7 490 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 TSC1Q92574 1164 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 TNFRSF25Q93038 417 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 CEP170P1Q96L14 293 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 SAMSN1Q9NSI8 373 aaKnown RBP9.1□□□□□ -0.95
NLK-201ENST00000407008 FBXO28Q9NVF7 368 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 ODF2LQ9ULJ1 636 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 PCDHAC2Q9Y5I4 1007 aa9.1□□□□□ -0.95
NLK-201ENST00000407008 ASB14A6NK59 587 aa9.09□□□□□ -0.95
NLK-201ENST00000407008 FZD9O00144 591 aa9.09□□□□□ -0.95
NLK-201ENST00000407008 MEIS1O00470 390 aa9.09□□□□□ -0.95
NLK-201ENST00000407008 DDNO94850 711 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms