RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 M0R2C6 588 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF18P17022 549 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 TTC30AQ86WT1 665 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 CDC26Q8NHZ8 85 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 PPP1R13BQ96KQ4 1090 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 TBK1Q9UHD2 729 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 PCDHA7Q9UN72 937 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 OCM2P0CE71 109 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 OCMP0CE72 109 aaPredicted RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 MAN2A1Q16706 1144 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 MAML1Q92585 1016 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ANGPTL2Q9UKU9 493 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 DRP2Q13474 957 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 GIPC2Q8TF65 315 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 MYH6P13533 1939 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 TJP3O95049 919 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 MT-ND3P03897 115 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 ALCAMQ13740 583 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 HEXIM2Q96MH2 286 aaKnown RBP12.98□□□□□ -0.33
SMCR8-201ENST00000406438 SLITRK6Q9H5Y7 841 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 SUFUQ9UMX1 484 aa12.98□□□□□ -0.33
SMCR8-201ENST00000406438 RGS12O14924 1447 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SPHKAPQ2M3C7 1700 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 IQANK1A0A1B0GTG1 560 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 PSAPP07602 524 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 HSPA6P17066 643 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 PEX19P40855 299 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SNX19Q92543 992 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SFMBT1Q9UHJ3 866 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TMCC1O94876 653 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 RWDD4Q6NW29 188 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SERPING1P05155 500 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 LIG3P49916 1009 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TRMT10CQ7L0Y3 403 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 MORC4Q8TE76 937 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 PLS3P13797 630 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TAC1P20366 129 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 ETF1P62495 437 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 EDC3Q96F86 508 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SRGAP2CP0DJJ0 459 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 CCT5P48643 541 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TMC4Q7Z404 712 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 PACSIN2Q9UNF0 486 aaPredicted RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 BRD1O95696 1058 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 ARPP19P56211 112 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 TBC1D10BQ4KMP7 808 aaPredicted RBP12.97□□□□□ -0.33
SMCR8-201ENST00000406438 CRLF3Q8IUI8 442 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 SPATA17Q96L03 361 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 FSD1LQ9BXM9 530 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 YEATS2Q9ULM3 1422 aa12.97□□□□□ -0.33
SMCR8-201ENST00000406438 DDIT3P35638 169 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 ZKSCAN8Q15776 578 aaPredicted RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PYROXD1Q8WU10 500 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 P2RX5Q93086 422 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 CENPKQ9BS16 269 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 KIFC3Q9BVG8 833 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 KANSL2Q9H9L4 492 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 HACD3Q9P035 362 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 TCHHQ07283 1943 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PDE8BO95263 885 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 CASP14P31944 242 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 NLRP4Q96MN2 994 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF212Q9UDV6 495 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 ABT1Q9ULW3 272 aaKnown RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 MYH11P35749 1972 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 UBE3CQ15386 1083 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 MRFAP1L1Q96HT8 127 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PDIA3P30101 505 aaKnown RBP12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PLTPP55058 493 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 PDXDC2PQ6P474 469 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 CENPUQ71F23 418 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 HSPH1Q92598 858 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.33
SMCR8-201ENST00000406438 TRPA1O75762 1119 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 CIAO1O76071 339 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 GNAT1P11488 350 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 CXCR5P32302 372 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms