RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 USP17L22D6RA61 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L17D6RBQ6 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L19D6RCP7 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L20D6RJB6 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 GFPT2O94808 682 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CLSTN1O94985 981 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 VIMP08670 466 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 PCP11498 1178 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 BTDP43251 543 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L24Q0WX57 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CDC37Q16543 378 aaPredicted RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 ALKBH5Q6P6C2 394 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 IQCKQ8N0W5 287 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 TAF1DQ9H5J8 278 aaPredicted RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 LAD1O00515 517 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CETN3O15182 167 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 PPP1R7Q15435 360 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 ARHGAP44Q17R89 818 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 FAM133BQ5BKY9 247 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 HGSNATQ68CP4 663 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 EP400NLQ6ZTU2 488 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 GUF1Q8N442 669 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 TCP11Q8WWU5 503 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 NEUROG2Q9H2A3 272 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 IKZF4Q9H2S9 585 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 MYH13Q9UKX3 1938 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 COL1A1P02452 1464 aaPredicted RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 KIF1AQ12756 1690 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 GMNCA6NCL1 334 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 PPP1R12BO60237 982 aaPredicted RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 CLTAP09496 248 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 RASA1P20936 1047 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 PLTPP55058 493 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 NAB2Q15742 525 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 SLC18A3Q16572 532 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 ARFGAP2Q8N6H7 521 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CAVIN3Q969G5 261 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 ZMYND12Q9H0C1 365 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CEP72Q9P209 647 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 OPLAHO14841 1288 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 CTNND1O60716 968 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 FGGP02679 453 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 LRRC63Q05C16 580 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 CCDC38Q502W7 563 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 POTEEQ6S8J3 1075 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 KDM7AQ6ZMT4 941 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 MAEAQ7L5Y9 396 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 CACNA2D3Q8IZS8 1091 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 ANKS1AQ92625 1134 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 N4BP2L2Q92802 583 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 BCAS3Q9H6U6 928 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 PRLRP16471 622 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 FIGNQ5HY92 759 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 MSL1Q68DK7 614 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 LRRC55Q6ZSA7 311 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 DYDC1Q8WWB3 177 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 PIK3R5Q8WYR1 880 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 SLC40A1Q9NP59 571 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 CHMP2AO43633 222 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 TAL1P17542 331 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 PRPHP41219 470 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 PPP1R2P41236 205 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 TBC1D10BQ4KMP7 808 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 DPP8Q6V1X1 898 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 ZNF571Q7Z3V5 609 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 RNF10Q8N5U6 811 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 METTL13Q8N6R0 699 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 GLG1Q92896 1179 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 LRRC4CQ9HCJ2 640 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 ARMCX3Q9UH62 379 aaPredicted RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 PNMA2Q9UL42 364 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 SNX24Q9Y343 169 aa10.03□□□□□ -0.8
HPS4-203ENST00000402105 RTCBQ9Y3I0 505 aaKnown RBP10.03□□□□□ -0.8
HPS4-203ENST00000402105 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.81
HPS4-203ENST00000402105 NOL4O94818 638 aa10.02□□□□□ -0.81
HPS4-203ENST00000402105 KIF4AO95239 1232 aa10.02□□□□□ -0.81
HPS4-203ENST00000402105 PLA2G4BP0C869 781 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms