RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ANO9A1A5B4 782 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 PEX14O75381 377 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 C2orf54Q08AI8 447 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ATAD3BQ5T9A4 648 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 NCAPH2Q6IBW4 605 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 FAM207AQ9NSI2 230 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ZCCHC11Q5TAX3 1644 aaKnown RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 KRIT1O00522 736 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 CALUO43852 315 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 GSTA2P09210 222 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 H2AFXP16104 143 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 TNFAIP3P21580 790 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
SMAD9-203ENST00000399275 PLIN5Q00G26 463 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 AKNAD1Q5T1N1 836 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 DNAJC9Q8WXX5 260 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 RNPEPQ9H4A4 650 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 ATP6V0A4Q9HBG4 840 aa10.35□□□□□ -0.75
SMAD9-203ENST00000399275 PLEKHG3A1L390 1219 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 GNGT2O14610 69 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 SLC9A5Q14940 896 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 KLC3Q6P597 504 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NFATC2IPQ8NCF5 419 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ITFG2Q969R8 447 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NRDE2Q9H7Z3 1164 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ZFYVE1Q9HBF4 777 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 SAMSN1Q9NSI8 373 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 AMFRQ9UKV5 643 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RFX7Q2KHR2 1363 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 TET3O43151 1660 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 TBKBP1A7MCY6 615 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RSPH10B2B2RC85 870 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 KCNK3O14649 394 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RSPH10BP0C881 870 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 PECAM1P16284 738 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 HP1BP3Q5SSJ5 553 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 KRT25Q7Z3Z0 450 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 CABP7Q86V35 215 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 IL17REQ8NFR9 667 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 DCDC2Q9UHG0 476 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RABL2BQ9UNT1 228 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 CFAP65Q6ZU64 1925 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 GMNCA6NCL1 334 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 HEXIM1O94992 359 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 S100A1P23297 94 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 GGCXP38435 758 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RUNDC3BQ96NL0 473 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ING2Q9H160 280 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 DPH5Q9H2P9 285 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 STX18Q9P2W9 335 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 BTBD18B2RXH4 712 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 E7ENQ6 273 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ZMYND10O75800 440 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 MYL1P05976 194 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 TUBA1BP68363 451 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ZNF658Q5TYW1 1059 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 TUBA1AQ71U36 451 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NLRP14Q86W24 1093 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 HIPK4Q8NE63 616 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 HNRNPLLQ8WVV9 542 aaKnown RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ETNK1Q9HBU6 452 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NDUFA13Q9P0J0 144 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 H0Y626 953 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 FGAP02671 866 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 PDE6CP51160 858 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 LETM2Q2VYF4 491 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 NUGGCQ68CJ6 796 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 RASSF3Q86WH2 238 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 CATSPER3Q86XQ3 398 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 CCDC103Q8IW40 242 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ASZ1Q8WWH4 475 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 STAMQ92783 540 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 DHTKD1Q96HY7 919 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-203ENST00000399275 KLHL31Q9H511 634 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 ECT2Q9H8V3 914 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 EPB41L5Q9HCM4 733 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
SMAD9-203ENST00000399275 E9PCH4 1651 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 ERCC6L2Q5T890 1561 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 MAFGO15525 162 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 GUCY1B2O75343 617 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 USP14P54578 494 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 ASPHQ12797 758 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 STRN3Q13033 797 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 TSGA10IPQ3SY00 556 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 NLRP9Q7RTR0 991 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 STX12Q86Y82 276 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 ANKRD35Q8N283 1001 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
SMAD9-203ENST00000399275 MIGA1Q8NAN2 632 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 MIEF2Q96C03 454 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 ARMT1Q9H993 441 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 TAF4O00268 1085 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 THAP12O43422 761 aa10.33□□□□□ -0.76
SMAD9-203ENST00000399275 MSL3P1P0C860 447 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms