RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 H3BUI4 141 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EYA2O00167 538 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NDUFAB1O14561 156 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PFDN1O60925 122 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NPTXRO95502 500 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 OR52Z1P0C646 297 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SUPT20HL2P0C7V6 817 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ELF1P32519 619 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GTF2A2P52657 109 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EFNA5P52803 228 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TERF1P54274 439 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CAV1Q03135 178 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PTK2Q05397 1052 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 INTS8Q75QN2 995 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 UNC5CLQ8IV45 518 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.94□□□□□ -1.94
CHD9-202ENST00000398510 BRIP1Q9BX63 1249 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ARMC7Q9H6L4 198 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 IRAK4Q9NWZ3 460 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TFIP11Q9UBB9 837 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 PI4KBQ9UBF8 816 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 DSEQ9UL01 958 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ATRXP46100 2492 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TMEM94Q12767 1356 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 RNMTO43148 476 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 KLHL41O60662 606 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CAPN15O75808 1086 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 FGF19O95750 216 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TRIM27P14373 513 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 LIG1P18858 919 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TNNI1P19237 187 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 UBASH3AP57075 661 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 AP2B1P63010 937 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 STK3Q13188 491 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CERKLQ49MI3 558 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 DCAF6Q58WW2 860 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TMCO4Q5TGY1 634 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 KLHL10Q6JEL2 608 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TRIM72Q6ZMU5 477 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MICALL2Q8IY33 904 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SMAP1Q8IYB5 467 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 TSPAN18Q96SJ8 248 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 KRT12Q99456 494 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 GCOM2Q9BZD3 368 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 BICC1Q9H694 974 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 RAB23Q9ULC3 237 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 STAP1Q9ULZ2 295 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 USP20Q9Y2K6 914 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NUB1Q9Y5A7 615 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 HUS1O60921 280 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ALDH1A2O94788 518 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 KRT8P05787 483 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 STAG3L1P0CL83 205 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CETPP11597 493 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NSFP46459 744 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 MXD4Q14582 209 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 KLHL40Q2TBA0 621 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NBPF10Q6P3W6 841 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 SIX6OS1Q8N1H7 587 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 APBB2Q92870 758 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MASTLQ96GX5 879 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EMILIN2Q9BXX0 1053 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 DNAAF2Q9NVR5 837 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 DPYSL4O14531 572 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MTSS1O43312 755 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TAC1P20366 129 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MUTP22033 750 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 VASPP50552 380 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 RPS6KA2Q15349 733 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 P3H1Q32P28 736 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TEDDM1Q5T9Z0 273 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TBC1D9Q6ZT07 1266 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 KRT27Q7Z3Y8 459 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 HS6ST3Q8IZP7 471 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TSEN34Q9BSV6 310 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 SPATA16Q9BXB7 569 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 NSMCE4AQ9NXX6 385 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ABI2Q9NYB9 513 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 ANKFY1Q9P2R3 1169 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 STX18Q9P2W9 335 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 PALLDQ8WX93 1383 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 TRAK2O60296 914 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EXOC3O60645 756 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MPOP05164 745 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ITGB6P18564 788 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ITGAXP20702 1163 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 MCM7P33993 719 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 EIF3BP55884 814 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 KIF23Q02241 960 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 SLFN5Q08AF3 891 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 CLEC16AQ2KHT3 1053 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ITIH5Q86UX2 942 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ZNF655Q8N720 491 aaPredicted RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 C7orf57Q8NEG2 295 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 HTATIP2Q9BUP3 242 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 SNX25Q9H3E2 840 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 ZSWIM6Q9HCJ5 1215 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 THG1LQ9NWX6 298 aaKnown RBP2.94□□□□□ -1.94
CHD9-202ENST00000398510 RNF14Q9UBS8 474 aa2.94□□□□□ -1.94
CHD9-202ENST00000398510 LAMB2P55268 1798 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms