RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MCF2LO15068 1137 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 RABL6Q3YEC7 729 aaPredicted RBP16.95■□□□□ 0.3
GNE-202ENST00000396594 RESP18Q5W5W9 173 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 CYP27B1O15528 508 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 HEXIM1O94992 359 aaKnown RBP16.95■□□□□ 0.3
GNE-202ENST00000396594 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 SASH1O94885 1247 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 SBK1Q52WX2 424 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
GNE-202ENST00000396594 CLTCQ00610 1675 aaKnown RBP16.95■□□□□ 0.3
GNE-202ENST00000396594 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
GNE-202ENST00000396594 TAP1Q03518 808 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 WHAMMQ8TF30 809 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 CD209Q9NNX6 404 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 ENTPD3O75355 529 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 LPAR1Q92633 364 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 RPLP2P05387 115 aaKnown RBP16.94■□□□□ 0.3
GNE-202ENST00000396594 MMP10P09238 476 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 GOLGA8HP0CJ92 632 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 MAPK4P31152 587 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
GNE-202ENST00000396594 THEM5Q8N1Q8 247 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 PIH1D3Q9NQM4 214 aaKnown RBP16.94■□□□□ 0.3
GNE-202ENST00000396594 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 TECPR2O15040 1411 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 CPDO75976 1380 aa16.94■□□□□ 0.3
GNE-202ENST00000396594 UBE4BO95155 1302 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 BUB1BO60566 1050 aaPredicted RBP16.93■□□□□ 0.3
GNE-202ENST00000396594 DNAJC24Q6P3W2 148 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 AFF2P51816 1311 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 CUL1Q13616 776 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 TBX3O15119 743 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 IL9RQ01113 521 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 AFG3L2Q9Y4W6 797 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 NDUFB9Q9Y6M9 179 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
GNE-202ENST00000396594 CALB1P05937 261 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 DLATP10515 647 aaKnown RBP16.93■□□□□ 0.3
GNE-202ENST00000396594 DYNLL1P63167 89 aaKnown RBP16.93■□□□□ 0.3
GNE-202ENST00000396594 NR1H3Q13133 447 aa16.93■□□□□ 0.3
GNE-202ENST00000396594 PRKG1Q13976 671 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 HOMEZQ8IX15 550 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 CCDC13Q8IYE1 715 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 TTC25Q96NG3 672 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 PUS7LQ9H0K6 701 aaKnown RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 CNTNAP4Q9C0A0 1308 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 ATP2C2O75185 946 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 GFPT2O94808 682 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 ECEL1O95672 775 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 HPDP32754 393 aaPredicted RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 CEP72Q9P209 647 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
GNE-202ENST00000396594 ANO9A1A5B4 782 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 RPS6KA2Q15349 733 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 KIRREL3Q8IZU9 778 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 LRRC4Q9HBW1 653 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 PFASO15067 1338 aa16.92■□□□□ 0.3
GNE-202ENST00000396594 STXBP3O00186 592 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 AP3B1O00203 1094 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 GOLGA8FQ08AF8 430 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 GOLGA8DPQ0D2H9 430 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ZNF653Q96CK0 615 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
GNE-202ENST00000396594 INO80B-WBP1J3KQ70 363 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 PODXLO00592 558 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 TTLL4Q14679 1199 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
GNE-202ENST00000396594 TUFT1Q9NNX1 390 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 TFDP2Q14188 446 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 STILQ15468 1287 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ALS2CLQ60I27 953 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 RASEFQ8IZ41 740 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 COA7Q96BR5 231 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 ELOA2Q8IYF1 753 aaPredicted RBP16.91■□□□□ 0.3
GNE-202ENST00000396594 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
GNE-202ENST00000396594 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
GNE-202ENST00000396594 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
GNE-202ENST00000396594 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 KIF3CO14782 793 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 HOXC6P09630 235 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 EFNA5P52803 228 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms