RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PIP4K2CQ8TBX8 421 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 NDNQ99608 321 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 SAMSN1Q9NSI8 373 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 CLIC4Q9Y696 253 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ANKRD36CQ5JPF3 1778 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 SPDYE3A6NKU9 549 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 RPS6KA5O75582 802 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 ARL1P40616 181 aaPredicted RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 MLH1P40692 756 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 EPS15P42566 896 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 MTIF2P46199 727 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 SKOR1P84550 965 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ZBED6P86452 979 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 TCIRG1Q13488 830 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 LRRC36Q1X8D7 754 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 C6orf183Q5T699 404 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 KIF6Q6ZMV9 814 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ATP11CQ8NB49 1132 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 RETREG2Q8NC44 543 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 PLEKHG4BQ96PX9 1271 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 KRT12Q99456 494 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 PIDD1Q9HB75 910 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 DNAJC17Q9NVM6 304 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 DDX18Q9NVP1 670 aaKnown RBP9.17□□□□□ -0.94
NDE1-202ENST00000396355 FAM53CQ9NYF3 392 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 ANKIB1Q9P2G1 1089 aa9.17□□□□□ -0.94
NDE1-202ENST00000396355 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
NDE1-202ENST00000396355 MAFGO15525 162 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 BUB1O43683 1085 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 TRPA1O75762 1119 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 NFKBIAP25963 317 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MAGEA8P43361 318 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 EPHB4P54760 987 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 NLRP5P59047 1200 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MAGOHP61326 146 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 HLFQ16534 295 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 KCTD19Q17RG1 926 aaPredicted RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 ANKRD20A2Q5SQ80 823 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ANKRD20A1Q5TYW2 823 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ANKRD20A3Q5VUR7 823 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ANO5Q75V66 913 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 C14orf80Q86SX3 495 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 FMR1NBQ8N0W7 255 aaPredicted RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 CXorf38Q8TB03 319 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MAGOHBQ96A72 148 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 DDX50Q9BQ39 737 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 NUP58Q9BVL2 599 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ZNF277Q9NRM2 450 aaPredicted RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.16□□□□□ -0.94
NDE1-202ENST00000396355 SPATA7Q9P0W8 599 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 RAD21O60216 631 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MRPS35P82673 323 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 HNRNPLLQ8WVV9 542 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 AIFM3Q96NN9 605 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 KLHL14Q9P2G3 628 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 NUP98P52948 1817 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 PCP4L1A6NKN8 68 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ADCY3O60266 1144 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 VCAM1P19320 739 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 PPP1R2P41236 205 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 LRRC14Q15048 493 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 C1QTNF12Q5T7M4 302 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 PPP1R2P3Q6NXS1 205 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 ADAT2Q7Z6V5 191 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 MDM1Q8TC05 714 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MPHOSPH6Q99547 160 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 LRRC1Q9BTT6 524 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 R3HDM2Q9Y2K5 976 aaKnown RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 EPN1Q9Y6I3 576 aaPredicted RBP9.16□□□□□ -0.94
NDE1-202ENST00000396355 CHD4Q14839 1912 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 MROH7-TTC4A0A0A0MT08 1334 aa9.16□□□□□ -0.94
NDE1-202ENST00000396355 UBE2Q2LH0YL09 131 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 GPAA1O43292 621 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 PRC1O43663 620 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 FAM107AO95990 144 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 CSF1RP07333 972 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 RASSF2P50749 326 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 METTL24Q5JXM2 366 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 ERICH1Q86X53 443 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 LINC00301Q8NCQ3 95 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 GREM2Q9H772 168 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 METTL5Q9NRN9 209 aaKnown RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 ARIH1Q9Y4X5 557 aaPredicted RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 KLF18A0A0U1RQI7 1052 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 A0A0U1RQJ8 604 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 SH3BGRP55822 239 aaPredicted RBP9.15□□□□□ -0.94
NDE1-202ENST00000396355 C11orf91Q3C1V1 193 aa9.15□□□□□ -0.94
NDE1-202ENST00000396355 FCHSD1Q86WN1 690 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms