RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 PLS1Q14651 629 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 SNX17Q15036 470 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 ECM1Q16610 540 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 TKFCQ3LXA3 575 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 VPS53Q5VIR6 699 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 SNRNP48Q6IEG0 339 aaKnown RBP7.23□□□□□ -1.25
PTPN20-208ENST00000395727 BTNL9Q6UXG8 535 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 CCDC129Q6ZRS4 1044 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 ZNF589Q86UQ0 364 aaPredicted RBP7.23□□□□□ -1.25
PTPN20-208ENST00000395727 ARRDC4Q8NCT1 418 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 TRPV1Q8NER1 839 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 EXOC6Q8TAG9 804 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 CHURC1Q8WUH1 139 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 ACDQ96AP0 544 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 FAM227BQ96M60 508 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 NUP88Q99567 741 aaPredicted RBP7.23□□□□□ -1.25
PTPN20-208ENST00000395727 GDF15Q99988 308 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 TINF2Q9BSI4 451 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 IL17RBQ9NRM6 502 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 LRRC37A2A6NM11 1700 aa7.23□□□□□ -1.25
PTPN20-208ENST00000395727 LOC102724159A0A0B4J2E5 919 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 TSPY2A6NKD2 308 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 SDSP20132 328 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 KCNA1Q09470 495 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 PWP2Q15269 919 aaKnown RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 FAM47AQ5JRC9 791 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 ZNF468Q5VIY5 522 aaPredicted RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 SLFN13Q68D06 897 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 LRRC47Q8N1G4 583 aaKnown RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 DCAF4Q8WV16 495 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 STAG1Q8WVM7 1258 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 TTC14Q96N46 770 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 OXCT2Q9BYC2 517 aaPredicted RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 GSX2Q9BZM3 304 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 MAF1Q9H063 256 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 RNF41Q9H4P4 317 aaPredicted RBP7.22□□□□□ -1.25
PTPN20-208ENST00000395727 ANO2Q9NQ90 1003 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 KLF15Q9UIH9 416 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 PNMA2Q9UL42 364 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 ZNF536O15090 1300 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 RAD50Q92878 1312 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 LTBP2Q14767 1821 aa7.22□□□□□ -1.25
PTPN20-208ENST00000395727 ZNFX1Q9P2E3 1918 aaKnown RBP7.21□□□□□ -1.25
PTPN20-208ENST00000395727 TMEM232C9JQI7 657 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 FAM13AO94988 1023 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 ZNF865P0CJ78 1059 aaPredicted RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 SNHG28P0DPA3 235 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 TOP1P11387 765 aaKnown RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 AKR1A1P14550 325 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 SLC1A4P43007 532 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 EIF1AXP47813 144 aaKnown RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 NKX3-2P78367 333 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 INSM1Q01101 510 aaPredicted RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 AKNAD1Q5T1N1 836 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 ZNF385CQ66K41 422 aaPredicted RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 ATCAYQ86WG3 371 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 RGL4Q8IZJ4 473 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 STK11IPQ8N1F8 1099 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 WHAMMQ8TF30 809 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 DSCC1Q9BVC3 393 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 ACAD9Q9H845 621 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 GDF2Q9UK05 429 aaPredicted RBP7.21□□□□□ -1.26
PTPN20-208ENST00000395727 STX8Q9UNK0 236 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 USP20Q9Y2K6 914 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 RIPK3Q9Y572 518 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 TACC3Q9Y6A5 838 aa7.21□□□□□ -1.26
PTPN20-208ENST00000395727 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
PTPN20-208ENST00000395727 KBTBD13C9JR72 458 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 RANBP6O60518 1105 aaKnown RBP7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ICAM1P05362 532 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 PGK2P07205 417 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 RARBP10826 455 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CST5P28325 142 aaPredicted RBP7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ADH6P28332 368 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CNGA1P29973 690 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CCINQ13939 588 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 LRRC41Q15345 812 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 LRRC26Q2I0M4 334 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CCDC178Q5BJE1 867 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ALKBH2Q6NS38 261 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 LYPD4Q6UWN0 246 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 MFSD6Q6ZSS7 791 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 C7orf61Q8IZ16 206 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 GOLGA6L1Q8N7Z2 621 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 FAM133AQ8N9E0 248 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 MORC4Q8TE76 937 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ANKS1AQ92625 1134 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ESR2Q92731 530 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 RILPL2Q969X0 211 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 FGD4Q96M96 766 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 MDFIQ99750 246 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
PTPN20-208ENST00000395727 ABHD16BQ9H3Z7 469 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 RAVER2Q9HCJ3 691 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms