RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PDLIM7Q9NR12 457 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 NR2E3Q9Y5X4 410 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 PDE4DIPQ5VU43 2346 aa22.56■■□□□ 1.2
SNCA-203ENST00000394986 HAS3O00219 553 aa22.55■■□□□ 1.2
SNCA-203ENST00000394986 FAAP100Q0VG06 881 aa22.55■■□□□ 1.2
SNCA-203ENST00000394986 LARP1BQ659C4 914 aaKnown RBP22.55■■□□□ 1.2
SNCA-203ENST00000394986 MCTP1Q6DN14 999 aa22.55■■□□□ 1.2
SNCA-203ENST00000394986 INTS4Q96HW7 963 aaKnown RBP22.55■■□□□ 1.2
SNCA-203ENST00000394986 PCYT2Q99447 389 aa22.55■■□□□ 1.2
SNCA-203ENST00000394986 TBC1D22BQ9NU19 505 aa22.55■■□□□ 1.2
SNCA-203ENST00000394986 SCN10AQ9Y5Y9 1956 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 H3BRB1 525 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 B4GALT4O60513 344 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 CLTBP09497 229 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 GCFC2P16383 781 aaKnown RBP22.54■■□□□ 1.2
SNCA-203ENST00000394986 LRCH2Q5VUJ6 765 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 TOX2Q96NM4 488 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 KATNAL1Q9BW62 490 aa22.54■■□□□ 1.2
SNCA-203ENST00000394986 TUT1Q9H6E5 874 aaKnown RBP22.54■■□□□ 1.2
SNCA-203ENST00000394986 TRMT13Q9NUP7 481 aaKnown RBP22.54■■□□□ 1.2
SNCA-203ENST00000394986 MROH7Q68CQ1 1323 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 TRIM43BA6NCK2 446 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 DCDC2CA8MYV0 355 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 CHMP2AO43633 222 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 GAS7O60861 476 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.2
SNCA-203ENST00000394986 MARK3P27448 753 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 NFRKBQ6P4R8 1299 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 TRIM43Q96BQ3 446 aaPredicted RBP22.53■■□□□ 1.2
SNCA-203ENST00000394986 NAP1L4Q99733 375 aaKnown RBP22.53■■□□□ 1.2
SNCA-203ENST00000394986 KCNMB3Q9NPA1 279 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 HDAC6Q9UBN7 1215 aa22.53■■□□□ 1.2
SNCA-203ENST00000394986 PSMD10O75832 226 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 CD4P01730 458 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 C7orf31Q8N865 590 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 GLG1Q92896 1179 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 RIT2Q99578 217 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 TEKT3Q9BXF9 490 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 UNC45AQ9H3U1 944 aa22.52■■□□□ 1.2
SNCA-203ENST00000394986 EMSYQ7Z589 1322 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 LGR5O75473 907 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 SUPT20HL2P0C7V6 817 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 KRT76Q01546 638 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 HIC1Q14526 733 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 NBR1Q14596 966 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 GDF6Q6KF10 455 aaPredicted RBP22.51■■□□□ 1.19
SNCA-203ENST00000394986 ZNF746Q6NUN9 644 aaPredicted RBP22.51■■□□□ 1.19
SNCA-203ENST00000394986 ABHD15Q6UXT9 468 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 CCDC60Q8IWA6 550 aaPredicted RBP22.51■■□□□ 1.19
SNCA-203ENST00000394986 HAS1Q92839 578 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 RNPEPQ9H4A4 650 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 TMEM39AQ9NV64 488 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
SNCA-203ENST00000394986 ZNF215Q9UL58 517 aaPredicted RBP22.51■■□□□ 1.19
SNCA-203ENST00000394986 VPS37CA5D8V6 355 aaPredicted RBP22.5■■□□□ 1.19
SNCA-203ENST00000394986 TLR3O15455 904 aaKnown RBP22.5■■□□□ 1.19
SNCA-203ENST00000394986 ATG7O95352 703 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 SMIM10L2AP0DMW4 78 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 SMIM10L2BP0DMW5 78 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 MCM7P33993 719 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 ZNF200P98182 395 aaPredicted RBP22.5■■□□□ 1.19
SNCA-203ENST00000394986 SPRYD3Q8NCJ5 442 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 SEZ6LQ9BYH1 1024 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 GTF2IRD1Q9UHL9 959 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 TBX21Q9UL17 535 aa22.5■■□□□ 1.19
SNCA-203ENST00000394986 BACH1O14867 736 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 NEMFO60524 1076 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 CYP2C9P11712 490 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 ITGB8P26012 769 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 PTPN11Q06124 597 aaPredicted RBP22.49■■□□□ 1.19
SNCA-203ENST00000394986 ZNF174Q15697 407 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 TTC38Q5R3I4 469 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 MIS18BP1Q6P0N0 1132 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 SMARCAD1Q9H4L7 1026 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 AZI2Q9H6S1 392 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 PRKAG2Q9UGJ0 569 aa22.49■■□□□ 1.19
SNCA-203ENST00000394986 IGKV6D-21A0A0A0MT36 114 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 WDR64B1ANS9 1081 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 MARCH6O60337 910 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 SYT1P21579 422 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 TOB1P50616 345 aaPredicted RBP22.48■■□□□ 1.19
SNCA-203ENST00000394986 SWSAP1Q6NVH7 229 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 B3GNT9Q6UX72 402 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 SMAP1Q8IYB5 467 aaPredicted RBP22.48■■□□□ 1.19
SNCA-203ENST00000394986 CTAGE1Q96RT6 745 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 TMEM60Q9H2L4 133 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 DISC1Q9NRI5 854 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 ERAP1Q9NZ08 941 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 VAV3Q9UKW4 847 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 SAMM50Q9Y512 469 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 CEP290O15078 2479 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 HSP90AA1P07900 732 aaKnown RBP22.48■■□□□ 1.19
SNCA-203ENST00000394986 STAT5BP51692 787 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 CALCRLQ16602 461 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 PTGISQ16647 500 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 FERMT3Q86UX7 667 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 FAM20AQ96MK3 541 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 PPP1R12CQ9BZL4 782 aa22.48■■□□□ 1.19
SNCA-203ENST00000394986 ZNF302Q9NR11 478 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms