RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ERO1AQ96HE7 468 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 SCLT1Q96NL6 688 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 CUEDC2Q9H467 287 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 ADAMTS1Q9UHI8 967 aa17.53■□□□□ 0.4
SMARCD1-202ENST00000394963 NDUFA10O95299 355 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 EEF1GP26641 437 aaKnown RBP17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 RNF207Q6ZRF8 634 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 RGS22Q8NE09 1264 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 SUGCTQ9HAC7 445 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 ADGRG1Q9Y653 693 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 CTAGE15A4D2H0 777 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 CTAGE8P0CG41 777 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 EIF4A3P38919 411 aaKnown RBP17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 NPEPPSP55786 919 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 CEP55Q53EZ4 464 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 CTAGE6Q86UF2 777 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 CTAGE4Q8IX94 777 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 COL4A3BPQ9Y5P4 624 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.4
SMARCD1-202ENST00000394963 DLATP10515 647 aaKnown RBP17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 MARK3P27448 753 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 TRAF1Q13077 416 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 MTMR1Q13613 665 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 TAF3Q5VWG9 929 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 MAP7D2Q96T17 732 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 LXNQ9BS40 222 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 NHEJ1Q9H9Q4 299 aaPredicted RBP17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 RNF146Q9NTX7 359 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 FRMD4BQ9Y2L6 1034 aa17.52■□□□□ 0.39
SMARCD1-202ENST00000394963 PAPPAQ13219 1627 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 TRIM49P0CI25 452 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 TRIM49CP0CI26 452 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 KRT83P78385 493 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 VWA3BQ502W6 1294 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 PLA2G4FQ68DD2 849 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 TAAR1Q96RJ0 339 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 NAPGQ99747 312 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 SOX10P56693 466 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 IRX3P78415 501 aaPredicted RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 CCDC70Q6NSX1 233 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 CGNQ9P2M7 1197 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 FAM237AA0A1B0GTK4 181 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 PEX3P56589 373 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 RPS6P62753 249 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 ADAT2Q7Z6V5 191 aaKnown RBP17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 KIFC3Q9BVG8 833 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 RUSC1Q9BVN2 902 aa17.51■□□□□ 0.39
SMARCD1-202ENST00000394963 KRT13P13646 458 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 AP3B2Q13367 1082 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 DCAF15Q66K64 600 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 PHLDB2Q86SQ0 1253 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 CSADQ9Y600 493 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 ERVK-24P63145 666 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 MAN2A1Q16706 1144 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 NT5DC1Q5TFE4 455 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 TTI2Q6NXR4 508 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 EHD4Q9H223 541 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 GPRC5CQ9NQ84 441 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 ESYT2A0FGR8 921 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 USP11P51784 963 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 CASP5P51878 434 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 MOB2Q70IA6 237 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 CYFIP1Q7L576 1253 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 THAP9Q9H5L6 903 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
SMARCD1-202ENST00000394963 PCNTO95613 3336 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 KLRC4O43908 158 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 CYP11B2P19099 503 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 RPL13P26373 211 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 DPH6Q7L8W6 267 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 C7orf25Q9BPX7 421 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 MLXIPQ9HAP2 919 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 MOCS3O95396 460 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 PDIA5Q14554 519 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 MTERF2Q49AM1 385 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 DUSP9Q99956 384 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 ANKRD36CQ5JPF3 1778 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 CASP4P49662 377 aa17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-202ENST00000394963 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 CDR1P51861 262 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 PPP1R18Q6NYC8 613 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 GJB7Q6PEY0 223 aa17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 PACSIN2Q9UNF0 486 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMARCD1-202ENST00000394963 KCNH2Q12809 1159 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms