RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.35
R3HDM2-203ENST00000393811 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.35
R3HDM2-203ENST00000393811 E9PMD0 336 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 RGS16O15492 202 aaPredicted RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 ZNF76P36508 570 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 KCNH2Q12809 1159 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 FAM133BQ5BKY9 247 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 SETDB2Q96T68 719 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 CYTH3O43739 400 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 SIK1P57059 783 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 GRB10Q13322 594 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 MDM1Q8TC05 714 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 ANKS1AQ92625 1134 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 RSRC1Q96IZ7 334 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 CELF4Q9BZC1 486 aaKnown RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 GDF3Q9NR23 364 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 TTI1O43156 1089 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 NEBLO76041 1014 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 FGGP02679 453 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 HVCN1Q96D96 273 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 VCPKMTQ9H867 229 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 IL17RBQ9NRM6 502 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 HDAC9Q9UKV0 1011 aa12.89□□□□□ -0.35
R3HDM2-203ENST00000393811 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 G3V3G9 751 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 BIRC3Q13489 604 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 LLGL1Q15334 1064 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 FMO2Q99518 471 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 TACO1Q9BSH4 297 aaKnown RBP12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 NSRP1Q9H0G5 558 aaKnown RBP12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 RASAL2Q9UJF2 1139 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 GFPT2O94808 682 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 FSBPO95073 299 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 TBC1D1Q86TI0 1168 aaPredicted RBP12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 RAB17Q9H0T7 212 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 SUFUQ9UMX1 484 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 PDHBP11177 359 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 PSMD2Q13200 908 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 DDB1Q16531 1140 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 SYCE1Q8N0S2 351 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 BAP1Q92560 729 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 PSMD1Q99460 953 aa12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 INTS9Q9NV88 658 aaKnown RBP12.88□□□□□ -0.35
R3HDM2-203ENST00000393811 MEIS1O00470 390 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 CLIC2O15247 247 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 SMTNP53814 917 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 PTK2Q05397 1052 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 PROM2Q8N271 834 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 ELAC2Q9BQ52 826 aaKnown RBP12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 TRIM51Q9BSJ1 452 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 ZMYND12Q9H0C1 365 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 SLC9A1P19634 815 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 STAT1P42224 750 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.354e-9■■■■□ 23.6
R3HDM2-203ENST00000393811 CYB5D1Q6P9G0 228 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
R3HDM2-203ENST00000393811 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms