RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 PCDHA4Q9UN74 947 aa15.92■□□□□ 0.14
SFXN3-202ENST00000393459 PTPN22Q9Y2R2 807 aa15.92■□□□□ 0.14
SFXN3-202ENST00000393459 SNX24Q9Y343 169 aa15.92■□□□□ 0.14
SFXN3-202ENST00000393459 SLC9A1P19634 815 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 TNNC1P63316 161 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 RNASELQ05823 741 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 DDB1Q16531 1140 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 CDC37Q16543 378 aaPredicted RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 PRMT1Q99873 361 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SMCO2A6NFE2 343 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SPDYE3A6NKU9 549 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 KRT18P05783 430 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 CHN1P15882 459 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 DIXDC1Q155Q3 683 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SLC30A10Q6XR72 485 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SEPT14Q6ZU15 432 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 FAM47EQ6ZV65 393 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SV2BQ7L1I2 683 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 GDAP1Q8TB36 358 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SNX29Q8TEQ0 813 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 ZNF384Q8TF68 577 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 BAP1Q92560 729 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 MRRFQ96E11 262 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 CALML4Q96GE6 196 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 TRIM6Q9C030 488 aaPredicted RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 ABCF3Q9NUQ8 709 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 GNAT2P19087 354 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 SLC35G1Q2M3R5 365 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 ARMC3Q5W041 872 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 PDXDC1Q6P996 788 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 DDX12PQ92771 950 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 ZBTB10Q96DT7 871 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 ZCWPW1Q9H0M4 648 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 PANK4Q9NVE7 773 aa15.91■□□□□ 0.14
SFXN3-202ENST00000393459 RBM28Q9NW13 759 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 NIP7Q9Y221 180 aaKnown RBP eCLIP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 NOC2LQ9Y3T9 749 aaKnown RBP15.91■□□□□ 0.14
SFXN3-202ENST00000393459 HMGB1P1B2RPK0 211 aaPredicted RBP15.9■□□□□ 0.14
SFXN3-202ENST00000393459 MMEP08473 750 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 OR52Z1P0C646 297 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
SFXN3-202ENST00000393459 FGFR4P22455 802 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 TNIP1Q15025 636 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 CCDC63Q8NA47 563 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 PAIP2Q9BPZ3 127 aaKnown RBP15.9■□□□□ 0.14
SFXN3-202ENST00000393459 OSGEPQ9NPF4 335 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
SFXN3-202ENST00000393459 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
SFXN3-202ENST00000393459 CLGNO14967 610 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 PTK2Q05397 1052 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 MAN2A1Q16706 1144 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 HGSNATQ68CP4 663 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 PEX26Q7Z412 305 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 LRRC34Q8IZ02 419 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 METTL13Q8N6R0 699 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 TMOD4Q9NZQ9 345 aa15.9■□□□□ 0.14
SFXN3-202ENST00000393459 FGGP02679 453 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 TSPY3P0CV98 308 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 TSPY8P0CW00 308 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 SLURP2P0DP57 97 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
SFXN3-202ENST00000393459 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
SFXN3-202ENST00000393459 AZI2Q9H6S1 392 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.89■□□□□ 0.13
SFXN3-202ENST00000393459 MEIS1O00470 390 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 TRAPPC3O43617 180 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 FGFR2P21802 821 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 BYSLQ13895 437 aaKnown RBP15.89■□□□□ 0.13
SFXN3-202ENST00000393459 UBE2SQ16763 222 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 CNNM4Q6P4Q7 775 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
SFXN3-202ENST00000393459 ERGIC2Q96RQ1 377 aa15.89■□□□□ 0.13
SFXN3-202ENST00000393459 H0Y3Z8 333 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 CREB1P16220 341 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 GCFC2P16383 781 aaKnown RBP15.88■□□□□ 0.13
SFXN3-202ENST00000393459 VPS41P49754 854 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 TMED8Q6PL24 325 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-202ENST00000393459 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 MAPKAPK5Q8IW41 473 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 RIOK1Q9BRS2 568 aaKnown RBP15.88■□□□□ 0.13
SFXN3-202ENST00000393459 TBK1Q9UHD2 729 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 SFI1A8K8P3 1242 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 E9PMD0 336 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 SLC37A4O43826 429 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 ANP32DO95626 131 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 MMP14P50281 582 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 MECOMQ03112 1051 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 FAXDC2Q96IV6 333 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 DCP1AQ9NPI6 582 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-202ENST00000393459 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 A0A1B0GUA9 196 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
SFXN3-202ENST00000393459 CLIC2O15247 247 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms