RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 KLRC3Q07444 240 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 ELAVL2Q12926 359 aaKnown RBP8.99□□□□□ -0.97
LIMS1-203ENST00000393310 TMEM266Q2M3C6 531 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 ARHGAP15Q53QZ3 475 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 KIAA0319Q5VV43 1072 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 WDR75Q8IWA0 830 aaKnown RBP8.99□□□□□ -0.97
LIMS1-203ENST00000393310 C12orf42Q96LP6 360 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 COLEC11Q9BWP8 271 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 IL1RAPL2Q9NP60 686 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 MKL2Q9ULH7 1088 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 NOL7Q9UMY1 257 aaKnown RBP8.99□□□□□ -0.97
LIMS1-203ENST00000393310 MON2Q7Z3U7 1717 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 ZNF532Q9HCE3 1301 aa8.99□□□□□ -0.97
LIMS1-203ENST00000393310 CAPN8A6NHC0 703 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 LAMTOR5O43504 91 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 IVLP07476 585 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 DESP17661 470 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 WTAPQ15007 396 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 LRRC23Q53EV4 343 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 NAALADL2Q58DX5 795 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 SPC24Q8NBT2 197 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 CSGALNACT1Q8TDX6 532 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PRIMPOLQ96LW4 560 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 RMDN3Q96TC7 470 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 MED4Q9NPJ6 270 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 CXXC1Q9P0U4 656 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 KANSL3Q9P2N6 904 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 FBXO9Q9UK97 447 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 POLIQ9UNA4 740 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 CASZ1Q86V15 1759 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PDE6AP16499 860 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 DPP6P42658 865 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 TSPY1Q01534 308 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 RHPN1Q8TCX5 695 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 BHMTQ93088 406 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 KIF12Q96FN5 646 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PAXBP1Q9Y5B6 917 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 RPS6KA5O75582 802 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 NLRP5P59047 1200 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 ARHGAP4P98171 946 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 NMIQ13287 307 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 VEPH1Q14D04 833 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 FLCNQ8NFG4 579 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 RPGRIP1Q96KN7 1286 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 SPATA32Q96LK8 384 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 NGRNQ9NPE2 291 aaKnown RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 AKT3Q9Y243 479 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 AOX1Q06278 1338 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 MAP3K13O43283 966 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 LGR5O75473 907 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 EEF2P13639 858 aaKnown RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 FOSL1P15407 271 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 CXCL17Q6UXB2 119 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 LRRC8DQ7L1W4 858 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 UBALD2Q8IYN6 164 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 TTC14Q96N46 770 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 GCOM2Q9BZD3 368 aaPredicted RBP8.98□□□□□ -0.97
LIMS1-203ENST00000393310 GRPEL1Q9HAV7 217 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 SEPT10Q9P0V9 454 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 TMX2Q9Y320 296 aa8.98□□□□□ -0.97
LIMS1-203ENST00000393310 PER1O15534 1290 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-203ENST00000393310 MSL3P1P0C860 447 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SHHQ15465 462 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 CABP7Q86V35 215 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SSH1Q8WYL5 1049 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SGSM3Q96HU1 749 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SLC32A1Q9H598 525 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 ARIH1Q9Y4X5 557 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 PRR5-ARHGAP8B1AHC4 643 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 ARHGAP8P85298 464 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 USH1GQ495M9 461 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 NOC3LQ8WTT2 800 aaKnown RBP8.97□□□□□ -0.97
LIMS1-203ENST00000393310 FAM49AQ9H0Q0 323 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-203ENST00000393310 FLT1P17948 1338 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 A0A1W2PQ45 241 aaPredicted RBP8.97□□□□□ -0.97
LIMS1-203ENST00000393310 A0A1W2PQY0 241 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 ACRP10323 421 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 ABL2P42684 1182 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 ARID5AQ03989 594 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 SDE2Q6IQ49 451 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 NFRKBQ6P4R8 1299 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 TBC1D9Q6ZT07 1266 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 G2E3Q7L622 706 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 FAM76AQ8TAV0 307 aa8.97□□□□□ -0.97
LIMS1-203ENST00000393310 STXBP4Q6ZWJ1 553 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 IFT74Q96LB3 600 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 NACC1Q96RE7 527 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 GDF15Q99988 308 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 UNC45AQ9H3U1 944 aa8.96□□□□□ -0.97
LIMS1-203ENST00000393310 THG1LQ9NWX6 298 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms