RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 TBC1D7Q9P0N9 293 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 FAM184BQ9ULE4 1060 aa15.82■□□□□ 0.12
MKS1-203ENST00000393120 MEIS1O00470 390 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 IPO7O95373 1038 aaKnown RBP15.81■□□□□ 0.12
MKS1-203ENST00000393120 RPS12P25398 132 aaKnown RBP15.81■□□□□ 0.12
MKS1-203ENST00000393120 GHRHRQ02643 423 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 GLIPR1L2Q4G1C9 344 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 DALRD3Q5D0E6 543 aaKnown RBP15.81■□□□□ 0.12
MKS1-203ENST00000393120 SRGAP1Q7Z6B7 1085 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 FBXO41Q8TF61 875 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 JDP2Q8WYK2 163 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 REEP2Q9BRK0 252 aa15.81■□□□□ 0.12
MKS1-203ENST00000393120 NUCKS1Q9H1E3 243 aaKnown RBP15.81■□□□□ 0.12
MKS1-203ENST00000393120 KRT86O43790 486 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 LCA5LO95447 670 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 ICAM1P05362 532 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 HSD17B4P51659 736 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 SETQ01105 290 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 KCNMA1Q12791 1236 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 KNOP1Q1ED39 458 aaKnown RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 BAP1Q92560 729 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 LPAR1Q92633 364 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 SYN2Q92777 582 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 GOLGA1Q92805 767 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 CCDC42Q96M95 316 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 WDR11Q9BZH6 1224 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 TAOK3Q9H2K8 898 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 MMRN2Q9H8L6 949 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 ARGLU1Q9NWB6 273 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 FAM53CQ9NYF3 392 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 PDXKO00764 312 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 CETN3O15182 167 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 EPHB6O15197 1021 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 SLITRK3O94933 977 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 GAP43P17677 238 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 ADAM9Q13443 819 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 RASA3Q14644 834 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 WHAMMP3Q1A5X7 153 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 LRCH2Q5VUJ6 765 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 B3GNT9Q6UX72 402 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 NELFCDQ8IXH7 590 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 SAMD3Q8N6K7 520 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 NEK11Q8NG66 645 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 GLIS2Q9BZE0 524 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 BHMT2Q9H2M3 363 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
MKS1-203ENST00000393120 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
MKS1-203ENST00000393120 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
MKS1-203ENST00000393120 PRELPP51888 382 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 AMPD2Q01433 879 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 CCDC122Q5T0U0 273 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 SFR1Q86XK3 245 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
MKS1-203ENST00000393120 JAKMIP2Q96AA8 810 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
MKS1-203ENST00000393120 TSGA10Q9BZW7 698 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 KIAA1683Q9H0B3 1180 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 RGL1Q9NZL6 768 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
MKS1-203ENST00000393120 GUCA1BQ9UMX6 200 aa15.79■□□□□ 0.12
MKS1-203ENST00000393120 BCRP11274 1271 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CYP4A11Q02928 519 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 ZYXQ15942 572 aaKnown RBP15.78■□□□□ 0.12
MKS1-203ENST00000393120 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 NIPA1Q7RTP0 329 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 FRMD5Q7Z6J6 570 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 KIAA1328Q86T90 577 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 RIT2Q99578 217 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 ZNF341Q9BYN7 854 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 ZHX3Q9H4I2 956 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
MKS1-203ENST00000393120 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CEP72Q9P209 647 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 ARHGAP20Q9P2F6 1191 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.78■□□□□ 0.12
MKS1-203ENST00000393120 ZNF536O15090 1300 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 RPTORQ8N122 1335 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 SSU72P8A0A1W2PR75 194 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CALUO43852 315 aaPredicted RBP15.78■□□□□ 0.12
MKS1-203ENST00000393120 CTNND1O60716 968 aaKnown RBP15.78■□□□□ 0.12
MKS1-203ENST00000393120 GAS7O60861 476 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 INPP5BP32019 993 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 HOXD13P35453 343 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CLCN6P51797 869 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CASP5P51878 434 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 VAV2P52735 878 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 CHMP4BP1P59074 171 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
MKS1-203ENST00000393120 EPHA7Q15375 998 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 SPA17Q15506 151 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 PDXDC1Q6P996 788 aa15.78■□□□□ 0.12
MKS1-203ENST00000393120 C1orf186Q6ZWK4 172 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms