RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 KIAA1211LQ6NV74 962 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 TRIM59Q8IWR1 403 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 RBM12BQ8IXT5 1001 aaKnown RBP2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 RPUSD2Q8IZ73 545 aaKnown RBP2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 BVESQ8NE79 360 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 NTN5Q8WTR8 489 aaPredicted RBP2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 MRGPRX3Q96LB0 322 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 NKX2-4Q9H2Z4 354 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 SMOC1Q9H4F8 434 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 TLR9Q9NR96 1032 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 ASH2LQ9UBL3 628 aa2.87□□□□□ -1.95
RNU6-239P-201ENST00000390990 MYO1BO43795 1136 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 DGKIO75912 1065 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 DNAJA1P31689 397 aaKnown RBP2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 MRPS21P82921 87 aaKnown RBP2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 FSTL1Q12841 308 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 LSAMPQ13449 338 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 MRPL58Q14197 206 aaKnown RBP2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 TBR1Q16650 682 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 POMZP3Q6PJE2 187 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 KREMEN2Q8NCW0 462 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 GPR150Q8NGU9 434 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 TTLL11Q8NHH1 800 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 PHOSPHO1Q8TCT1 267 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 CHAMP1Q96JM3 812 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 CARD11Q9BXL7 1154 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 CDIP1Q9H305 208 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 CLDND1Q9NY35 253 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 ARHGAP20Q9P2F6 1191 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 PCDHA2Q9Y5H9 948 aa2.86□□□□□ -1.95
RNU6-239P-201ENST00000390990 NOP56O00567 594 aaKnown RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC27A2O14975 620 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 MEFVO15553 781 aaPredicted RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 TBX1O43435 398 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 PROZP22891 400 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 MSX2P35548 267 aaPredicted RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 RRADP55042 308 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZC3H6P61129 1189 aaKnown RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 PFKPQ01813 784 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 KCNAB2Q13303 367 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 PRSS53Q2L4Q9 553 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF568Q3ZCX4 644 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 LDLRAD1Q5T700 205 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 LAIR1Q6GTX8 287 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 DENND5AQ6IQ26 1287 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 BHLHA9Q7RTU4 235 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 C19orf47Q8N9M1 422 aaKnown RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 BTN2A2Q8WVV5 523 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 CRBNQ96SW2 442 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 APBA2Q99767 749 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 TACO1Q9BSH4 297 aaKnown RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 C12orf65Q9H3J6 166 aaKnown RBP2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 EPB41L1Q9H4G0 881 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 NR2E1Q9Y466 385 aa2.85□□□□□ -1.95
RNU6-239P-201ENST00000390990 ESYT3A0FGR9 886 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 LTFP02788 710 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 PDE6AP16499 860 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 POLD1P28340 1107 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 ECI1P42126 302 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 GIPRP48546 466 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 EIF6P56537 245 aaKnown RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC25A3Q00325 362 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 TOP3AQ13472 1001 aaPredicted RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 TESK1Q15569 626 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 SF1Q15637 639 aaKnown RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF394Q53GI3 561 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 SPTY2D1Q68D10 685 aaPredicted RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 VHLLQ6RSH7 139 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 TMPRSS6Q8IU80 811 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 TRIM48Q8IWZ4 208 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 CRACR2BQ8N4Y2 399 aaPredicted RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 PIP4K2CQ8TBX8 421 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 CFHR4Q92496 578 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF764Q96H86 408 aaPredicted RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 JAM3Q9BX67 310 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 SLC6A20Q9NP91 592 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 GINM1Q9NU53 330 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 AURKAIP1Q9NWT8 199 aaPredicted RBP2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 PLA2G3Q9NZ20 509 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 PCDHGB7Q9Y5F8 929 aa2.84□□□□□ -1.95
RNU6-239P-201ENST00000390990 ZNF839A8K0R7 811 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 NUDT3O95989 172 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 SCG5P05408 212 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 FAHP16930 419 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 LTBRP36941 435 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 RPS19P39019 145 aaKnown RBP2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 TUSC3Q13454 348 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 PPP2R5EQ16537 467 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 PAN2Q504Q3 1202 aaKnown RBP2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 ACBD5Q5T8D3 534 aaPredicted RBP2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 CD276Q5ZPR3 534 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 ZKSCAN2Q63HK3 967 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 CYP4F22Q6NT55 531 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 SGMS1Q86VZ5 419 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 PPIL6Q8IXY8 311 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 PPP1R14AQ96A00 147 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 PARPBPQ9NWS1 579 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 GPRC5BQ9NZH0 403 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 TELO2Q9Y4R8 837 aa2.83□□□□□ -1.96
RNU6-239P-201ENST00000390990 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms