RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 DNAJC28Q9NX36 388 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 KCNK4Q9NYG8 393 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 USP36Q9P275 1121 aaKnown RBP2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 FNIP2Q9P278 1114 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 TMEFF2Q9UIK5 374 aaPredicted RBP2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 KCNG1Q9UIX4 513 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 GGA1Q9UJY5 639 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 KCNH3Q9ULD8 1083 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 CBLCQ9ULV8 474 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 L1RE1Q9UN81 338 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 PCDHA11Q9Y5I1 949 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 GPR45Q9Y5Y3 372 aa2.03□□□□□ -2.08
TRAJ39-201ENST00000390498 NPHP3-ACAD11A0A0J9YXS1 232 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 A0A0U1RQG5 324 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 A0A1B0GVC2 190 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 CCER2I3L3R5 266 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZNF561-AS1K7EIQ3 104 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 M0R082 166 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 KDM1AO60341 852 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 MGEA5O60502 916 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 DTNBO60941 627 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PPFIA3O75145 1194 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 HIP1RO75146 1068 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 NDUFS2O75306 463 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 LRRN2O75325 713 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 DEAF1O75398 565 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 KRT37O76014 449 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 UBXN7O94888 489 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SLITRK5O94991 958 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PRAMEF1O95521 474 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 LCP1P13796 627 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 MTHFD2P13995 350 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PDE6AP16499 860 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RPL17P18621 184 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PAMP19021 973 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SLC9A1P19634 815 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PDCP20941 246 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 C5AR1P21730 350 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ENPP1P22413 925 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 BMP8BP34820 402 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 GRK3P35626 688 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 IL12RB1P42701 662 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 KIR3DL1P43629 444 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 EIF5P55010 431 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 IRF9Q00978 393 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PPFIA1Q13136 1202 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 NMIQ13287 307 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 LSAMPQ13449 338 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 TRIM14Q14142 442 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PDCD1Q15116 288 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 LLGL1Q15334 1064 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 GPR19Q15760 415 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 FSCN1Q16658 493 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PGS1Q32NB8 556 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PLA2G4EQ3MJ16 856 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PKDCCQ504Y2 493 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RNF220Q5VTB9 566 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PPP4R3AQ6IN85 833 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 HHIPL2Q6UWX4 724 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 TMC3Q7Z5M5 1100 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ANKRD18AQ8IVF6 992 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SPNS2Q8IVW8 549 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 DMRTC2Q8IXT2 367 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 CISD2Q8N5K1 135 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 CAMKK1Q8N5S9 505 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 OR2C3Q8N628 320 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZNF655Q8N720 491 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 C12orf50Q8NA57 414 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 DAGLBQ8NCG7 672 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 C2CD4AQ8NCU7 369 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 NAXEQ8NCW5 288 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 C1orf131Q8NDD1 294 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZNF417Q8TAU3 575 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 GCC1Q96CN9 775 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RAX2Q96IS3 184 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 CDK5RAP3Q96JB5 506 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZC3H10Q96K80 434 aaKnown RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PPM1MQ96MI6 270 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RIPOR3Q96MK2 946 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZNF587Q96SQ5 575 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 TBCBQ99426 244 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ELF4Q99607 663 aaPredicted RBP2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SLC12A9Q9BXP2 914 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 MYLK2Q9H1R3 596 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 BHMT2Q9H2M3 363 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SMOC1Q9H4F8 434 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ZMAT4Q9H898 229 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PRDM10Q9NQV6 1147 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PDLIM7Q9NR12 457 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RASSF1Q9NS23 344 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 FAM105AQ9NUU6 356 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 SAGE1Q9NXZ1 904 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 RTEL1Q9NZ71 1219 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PLA2G2EQ9NZK7 142 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 CLEC1BQ9P126 229 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 POLG2Q9UHN1 485 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 ADGRE2Q9UHX3 823 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PADI4Q9UM07 663 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 POLHQ9Y253 713 aa2.02□□□□□ -2.09
TRAJ39-201ENST00000390498 PCDHGB3Q9Y5G1 929 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms