RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CLUHP3Q96NS8 147 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 TMEM209Q96SK2 561 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 SMURF1Q9HCE7 757 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 PARD6AQ9NPB6 346 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 INTS7Q9NVH2 962 aaKnown RBP3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 SFMBT1Q9UHJ3 866 aa3.52□□□□□ -1.85
RNU6-541P-201ENST00000384709 C9orf118A6NHY6 69 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 ENPP3O14638 875 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 COL6A1P12109 1028 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZNF28P17035 718 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 POU3F2P20265 443 aaPredicted RBP3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 GJA4P35212 333 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 HERVK_113P62684 666 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 RTP5Q14D33 572 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 CRY1Q16526 586 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 FAM47CQ5HY64 1035 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 FAM26FQ5R3K3 315 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 LILRA6Q6PI73 481 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 CD300LDQ6UXZ3 194 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 FGD2Q7Z6J4 655 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 NOP9Q86U38 636 aaKnown RBP3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 NOSTRINQ8IVI9 506 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 DLG3Q92796 817 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZBTB8AQ96BR9 441 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 C20orf173Q96LM9 149 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 MAGEB10Q96LZ2 347 aaPredicted RBP3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 WRNIP1Q96S55 665 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 DLL4Q9NR61 685 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 NTMQ9P121 344 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 NDOR1Q9UHB4 597 aa3.51□□□□□ -1.85
RNU6-541P-201ENST00000384709 CCDC66A2RUB6 948 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 FAM83GA6ND36 823 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 FAM90A27PA6NNH2 459 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZNF839A8K0R7 811 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 B4E1Z4 1266 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 NOBOXO60393 691 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 MAFO75444 373 aaPredicted RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 DNAJC8O75937 253 aaPredicted RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 LTFP02788 710 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 C4BPAP04003 597 aaKnown RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ASLP04424 464 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZBTB48P10074 688 aaPredicted RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 HOXA5P20719 270 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 SDHAP31040 664 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 STAT5AP42229 794 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 SARSP49591 514 aaKnown RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 JAM2P57087 298 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ARHGAP44Q17R89 818 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 CD276Q5ZPR3 534 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ABHD17CQ6PCB6 329 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ARHGAP36Q6ZRI8 547 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 TTLL7Q6ZT98 887 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 FRMD5Q7Z6J6 570 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 KIAA0907Q7Z7F0 614 aaPredicted RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 OSTM1Q86WC4 334 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZNF761Q86XN6 746 aaPredicted RBP3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 KCNJ15Q99712 375 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 SYT3Q9BQG1 590 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 RTEL1Q9NZ71 1219 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 TBX22Q9Y458 520 aa3.5□□□□□ -1.85
RNU6-541P-201ENST00000384709 ESYT3A0FGR9 886 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 SMARCA5O60264 1052 aaPredicted RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 CYP7B1O75881 506 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 RASGRP1O95267 797 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 RAPGEF3O95398 923 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 ENO2P09104 434 aaPredicted RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 PDE6AP16499 860 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 PTPN1P18031 435 aaKnown RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 IGFALSP35858 605 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 KCNC1P48547 511 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 DBPQ10586 325 aaPredicted RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 PABPC4Q13310 644 aaKnown RBP eCLIP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 TCEA2Q15560 299 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 VMACQ2NL98 169 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 PLEKHG4Q58EX7 1191 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZCCHC8Q6NZY4 707 aaKnown RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 PKN3Q6P5Z2 889 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 C16orf86Q6ZW13 317 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 JAZF1Q86VZ6 243 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 HOMER1Q86YM7 354 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 IGDCC4Q8TDY8 1250 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 ADAMTS17Q8TE56 1095 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 ZCCHC14Q8WYQ9 949 aaKnown RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 MBD6Q96DN6 1003 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 YTHDC1Q96MU7 727 aaKnown RBP3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 KCND1Q9NSA2 647 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 BTBD7Q9P203 1132 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 B3GALT1Q9Y5Z6 326 aa3.49□□□□□ -1.85
RNU6-541P-201ENST00000384709 A0A0G2JLL6 359 aaPredicted RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 A0A1B0GTL3 188 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 OTOL1A6NHN0 477 aaPredicted RBP3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 SASH1O94885 1247 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 KLHL18O94889 574 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 KNG1P01042 644 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 INHBBP09529 407 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 BMP7P18075 431 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 AOAHP28039 575 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 ST5P78524 1137 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 GRIN1Q05586 938 aa3.48□□□□□ -1.85
RNU6-541P-201ENST00000384709 SMAD4Q13485 552 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms