RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 KDM5CP41229 1560 aa13.36□□□□□ -0.27
SRGAP3-202ENST00000383836 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 DEAF1O75398 565 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 PDE6BP35913 854 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 SLC44A4Q53GD3 710 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 TMEM154Q6P9G4 183 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 TTC1Q99614 292 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 NACA2Q9H009 215 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 WDR62O43379 1518 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 SRGAP2O75044 1071 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 DDIT3P35638 169 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 TTC25Q96NG3 672 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 SEMA3EO15041 775 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 TRAPPC10P48553 1259 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 PPARAQ07869 468 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 SERPINB2P05120 415 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 MRPS35P82673 323 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 MCUQ8NE86 351 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 GRID2IPA4D2P6 1211 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 DIAPH2O60879 1101 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 OSBPL5Q9H0X9 879 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 PSD3Q9NYI0 1048 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 FIS1Q9Y3D6 152 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 KLC3Q6P597 504 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ANKRD7Q92527 254 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ANO9A1A5B4 782 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 CAPN9O14815 690 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 FKBP3Q00688 224 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 JAG2Q9Y219 1238 aa13.35□□□□□ -0.27
SRGAP3-202ENST00000383836 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 HSPD1P10809 573 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 IQCB1Q15051 598 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 TTC17Q96AE7 1141 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 TAF1DQ9H5J8 278 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 ATP8A2Q9NTI2 1148 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 NOP56O00567 594 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 YARSP54577 528 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 FAM102BQ5T8I3 360 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 MRPL47Q9HD33 250 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 TTC37Q6PGP7 1564 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 NPR1P16066 1061 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 PDIK1LQ8N165 341 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 COPEO14579 308 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 KRT37O76014 449 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 LIG4P49917 911 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 ITKQ08881 620 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 H0YCG3 227 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 SUPT3HO75486 399 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 PALMO75781 387 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 SLC12A1Q13621 1099 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 HSPA4LO95757 839 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 PMS2P54278 862 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 TRIP13Q15645 432 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 KIF19Q2TAC6 998 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 ACAD11Q709F0 780 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 USP19O94966 1318 aa13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 MYCLP12524 364 aaPredicted RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
SRGAP3-202ENST00000383836 DDAH1O94760 285 aa13.33□□□□□ -0.27
SRGAP3-202ENST00000383836 KRT1P04264 644 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 SLC17A8Q8NDX2 589 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 DACH2Q96NX9 599 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 ARPP21Q9UBL0 812 aaPredicted RBP13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 KIAA0232Q92628 1395 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 MROH5Q6ZUA9 1318 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 LRRN2O75325 713 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 TNNC2P02585 160 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 CORO7P57737 925 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 IDI1Q13907 227 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 KRT31Q15323 416 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
SRGAP3-202ENST00000383836 KRT39Q6A163 491 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms