RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 TNNI2P48788 182 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 FKBP3Q00688 224 aaKnown RBP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 KLHL30Q0D2K2 578 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 PTGISQ16647 500 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 DDX42Q86XP3 938 aaKnown RBP eCLIP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 ATP6V1G3Q96LB4 118 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 INPP4AQ96PE3 977 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 KCNK3O14649 394 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 PPP1R37O75864 691 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 CDK8P49336 464 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 SLC18A3Q16572 532 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 GPATCH11Q8N954 259 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 ANKRD2Q9GZV1 360 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 RIC8AQ9NPQ8 531 aa17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 PPANQ9NQ55 473 aaKnown RBP17.58■□□□□ 0.4
ARHGEF1-204ENST00000378152 A6NNZ2 444 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 E7EVH7 732 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 EDIL3O43854 480 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■■□□ 18.4
ARHGEF1-204ENST00000378152 TUBB8Q3ZCM7 444 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 AKT1S1Q96B36 256 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 CCT8L2Q96SF2 557 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 EDEM3Q9BZQ6 932 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 LUC7LQ9NQ29 371 aaKnown RBP17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 PANK4Q9NVE7 773 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 NPHP3-ACAD11A0A0J9YXS1 232 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 BAG3O95817 575 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 USP38Q8NB14 1042 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 TAF4BQ92750 862 aa17.57■□□□□ 0.4
ARHGEF1-204ENST00000378152 IRS2Q9Y4H2 1338 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 MARCH6O60337 910 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 MDH1P40925 334 aaKnown RBP17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 UBE2SQ16763 222 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 CRY2Q49AN0 593 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 NLRP14Q86W24 1093 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 CNPY4Q8N129 248 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 AP1M1Q9BXS5 423 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 BCCIPQ9P287 314 aaKnown RBP eCLIP17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ERVK-9P63128 1117 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 LTBP1Q14766 1721 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 FAM26FQ5R3K3 315 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 WHAMMQ8TF30 809 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 DNAJC19Q96DA6 116 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 RAB34Q9BZG1 259 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ZHX3Q9H4I2 956 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ANKIB1Q9P2G1 1089 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ROBO3Q96MS0 1386 aa17.56■□□□□ 0.4
ARHGEF1-204ENST00000378152 ACTN1P12814 892 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 RXRBP28702 533 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 EPS15P42566 896 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 FNTAP49354 379 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 TNNC1P63316 161 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 IFT88Q13099 833 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 ASIC2Q16515 512 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 ZCWPW2Q504Y3 356 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 MREGQ8N565 214 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 YY1AP1Q9H869 796 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 CEP104O60308 925 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 ADCY7P51828 1080 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 PSMD2Q13200 908 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 ITGB3BPQ13352 177 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 PRPF38AQ8NAV1 312 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 GOLGA6L10A6NI86 522 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 BRD2P25440 801 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 RPS6KA1Q15418 735 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 CD302Q8IX05 232 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 NUCKS1Q9H1E3 243 aaKnown RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 TAF1DQ9H5J8 278 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF1-204ENST00000378152 E9PMD0 336 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 SYN2Q92777 582 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 GPCPD1Q9NPB8 672 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 HMGB1P1B2RPK0 211 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 HSD17B3P37058 310 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 TMEM119Q4V9L6 283 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 MICALCLQ6ZW33 695 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 LRRC47Q8N1G4 583 aaKnown RBP17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
ARHGEF1-204ENST00000378152 LOC102724159A0A0B4J2E5 919 aa17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 FAM170AA1A519 330 aa17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 BACH1O14867 736 aa17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 BTDP43251 543 aa17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 GRAPQ13588 217 aa17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 PWP2Q15269 919 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-204ENST00000378152 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms