RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PICALMQ13492 652 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM196AQ6ZSG2 479 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 C15orf52Q6ZUT6 534 aaKnown RBP18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM212AQ96EL1 285 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 UIMC1Q96RL1 719 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 TLR10Q9BXR5 811 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 NLRC4Q9NPP4 1024 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 ESYT3A0FGR9 886 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 CHUKO15111 745 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 RASSF7Q02833 373 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 KCNMA1Q12791 1236 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 PAK2Q13177 524 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 NLRP14Q86W24 1093 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 SUFUQ9UMX1 484 aa18.25■□□□□ 0.51
PCDHA1-201ENST00000378133 TRIM37O94972 964 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 HEXIM1O94992 359 aaKnown RBP18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 IL1R1P14778 569 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 GUCY2FP51841 1108 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 IFT88Q13099 833 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 EMC10Q5UCC4 262 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 MYCBPAPQ8TBZ2 947 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 ABCB11O95342 1321 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 ZSCAN5CA6NGD5 496 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 BUB1O43683 1085 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 AKR1B1P15121 316 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 MDH1P40925 334 aaKnown RBP18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 ACTN3Q08043 901 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 EHHADHQ08426 723 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 TSG101Q99816 390 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 TBC1D7Q9P0N9 293 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 GGA1Q9UJY5 639 aa18.24■□□□□ 0.51
PCDHA1-201ENST00000378133 hCG_1984214I3L0E3 225 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 TRAF5O00463 557 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 SSBP05455 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 HDLBPQ00341 1268 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 SATB1Q01826 763 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 CCDC40Q4G0X9 1142 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 PDXDC1Q6P996 788 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 ZNF713Q8N859 430 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 GIMAP7Q8NHV1 300 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 PIK3R5Q8WYR1 880 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 RIC8AQ9NPQ8 531 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 MARCH6O60337 910 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 SMTNP53814 917 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 PSMD2Q13200 908 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 ASTE1Q2TB18 679 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 TMEM119Q4V9L6 283 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 KLHDC7AQ5VTJ3 777 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 CD302Q8IX05 232 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 HAS1Q92839 578 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 DNAJC19Q96DA6 116 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 MTMR8Q96EF0 704 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 ATP6V1G3Q96LB4 118 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 NOX5Q96PH1 765 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 DDX25Q9UHL0 483 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-201ENST00000378133 E7EVH7 732 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 SLC1A4P43007 532 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 COASYQ13057 564 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 HGSNATQ68CP4 663 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 TTBK2Q6IQ55 1244 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 PRR5LQ6MZQ0 368 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 ADGRF4Q8IZF3 695 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 CENPHQ9H3R5 247 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 FAM107AO95990 144 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 FKBP3Q00688 224 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 FGFBP2Q9BYJ0 223 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 LRRC27Q9C0I9 530 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 PANK4Q9NVE7 773 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 COL4A3BPQ9Y5P4 624 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 SLC16A2P36021 539 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 MREGQ8N565 214 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 RNF14Q9UBS8 474 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 POLLQ9UGP5 575 aa18.22■□□□□ 0.51
PCDHA1-201ENST00000378133 HMGB1P1B2RPK0 211 aaPredicted RBP18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 PJA2O43164 708 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 PPP4R3AQ6IN85 833 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 NELFCDQ8IXH7 590 aa18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 TACO1Q9BSH4 297 aaKnown RBP18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 PPANQ9NQ55 473 aaKnown RBP18.21■□□□□ 0.51
PCDHA1-201ENST00000378133 TSKSQ9UJT2 592 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms