RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MSH4O15457 936 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MMP10P09238 476 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 RPA1P27694 616 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 EIF4A3P38919 411 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 POTEGQ6S5H5 508 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 TMEM179Q6ZVK1 233 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 TLR10Q9BXR5 811 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 VIPAS39Q9H9C1 493 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 KANSL2Q9H9L4 492 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 ARFGAP3Q9NP61 516 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 ZCCHC17Q9NP64 241 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 EML1O00423 815 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 ENTPD3O75355 529 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 CCDC122Q5T0U0 273 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 IRF2BP2Q7Z5L9 587 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 MYOCDQ8IZQ8 938 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 RUBCNQ92622 972 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 RANBP17Q9H2T7 1088 aaKnown RBP10.63□□□□□ -0.71
TRIM39-202ENST00000376659 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
TRIM39-202ENST00000376659 KRT79Q5XKE5 535 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 HSD17B14Q9BPX1 270 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 POLR3CQ9BUI4 534 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 ZC3H12CQ9C0D7 883 aaKnown RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 MAGEC2Q9UBF1 373 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 KCNG1Q9UIX4 513 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 TMEM59LQ9UK28 342 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PCDHGC5Q9Y5F6 944 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 SAR1BQ9Y6B6 198 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PSMD10O75832 226 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 TRIM21P19474 475 aaKnown RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 MRPL12P52815 198 aaKnown RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 REEP2Q9BRK0 252 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 GLT8D2Q9H1C3 349 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 ZSWIM4Q9H7M6 989 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PCDHA12Q9UN75 941 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 F5H6K3 240 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PLA2G6O60733 806 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 CYLC1P35663 651 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 MTIF2P46199 727 aaKnown RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 ZNF131P52739 623 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 KLRC3Q07444 240 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PPP2R5CQ13362 524 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 EPHA7Q15375 998 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 SLFN13Q68D06 897 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 CYP2W1Q8TAV3 490 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 TSGA10Q9BZW7 698 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
TRIM39-202ENST00000376659 KIAA1024Q9UPX6 916 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 PCDHA1Q9Y5I3 950 aa10.62□□□□□ -0.71
TRIM39-202ENST00000376659 ZSWIM8A7E2V4 1837 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 CTAGE15A4D2H0 777 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 CTAGE8P0CG41 777 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 SLC1A4P43007 532 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
TRIM39-202ENST00000376659 ATP2B2Q01814 1243 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 CASP8Q14790 479 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 CTAGE6Q86UF2 777 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 CTAGE4Q8IX94 777 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 SLFN12Q8IYM2 578 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 SLC5A5Q92911 643 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 RUSC1Q9BVN2 902 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 LRRC27Q9C0I9 530 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 PLCB1Q9NQ66 1216 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 HPCAL4Q9UM19 191 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 PPP1R37O75864 691 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 HLA-DOAP06340 250 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 SNAP25P60880 206 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 GFPT1Q06210 699 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-202ENST00000376659 RAB34Q9BZG1 259 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 FAM207AQ9NSI2 230 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-202ENST00000376659 JRKLQ9Y4A0 524 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 RPS6KA5O75582 802 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 KCNA3P22001 575 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 HAUS3Q68CZ6 603 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 LRRC57Q8N9N7 239 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 EHBP1Q8NDI1 1231 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 RPGRIP1Q96KN7 1286 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 OLFML3Q9NRN5 406 aa10.61□□□□□ -0.71
TRIM39-202ENST00000376659 MGAMO43451 1857 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 ZNF536O15090 1300 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 RSPH10B2B2RC85 870 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 KRT86O43790 486 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 MOCS3O95396 460 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 RSPH10BP0C881 870 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 ICA1Q05084 483 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 EZH2Q15910 746 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms