RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SYKP43405 635 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 NDUFA8P51970 172 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 TNFAIP2Q03169 654 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 LAMC2Q13753 1193 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 EMID1Q96A84 441 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-202ENST00000376237 POLR3CQ9BUI4 534 aaPredicted RBP25.74■■□□□ 1.71
HLA-C-202ENST00000376237 GOLPH3LQ9H4A5 285 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 SAMM50Q9Y512 469 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 PCDHA10Q9Y5I2 948 aa25.74■■□□□ 1.71
HLA-C-202ENST00000376237 CCNE2O96020 404 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 CYBAP13498 195 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 MUTP22033 750 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 RPA1P27694 616 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 ENGASEQ8NFI3 743 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 RASSF8Q8NHQ8 419 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 GPT2Q8TD30 523 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 EIF2AK1Q9BQI3 630 aaKnown RBP25.73■■□□□ 1.71
HLA-C-202ENST00000376237 MMTAG2Q9BU76 263 aaKnown RBP25.73■■□□□ 1.71
HLA-C-202ENST00000376237 NT5C3AQ9H0P0 336 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 TUFT1Q9NNX1 390 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 PCNTO95613 3336 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 HSPA8P11142 646 aaKnown RBP25.73■■□□□ 1.71
HLA-C-202ENST00000376237 AKR1A1P14550 325 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 ELNP15502 786 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 SMPD1P17405 629 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 LIG1P18858 919 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 CCT6AP40227 531 aaKnown RBP25.73■■□□□ 1.71
HLA-C-202ENST00000376237 CTCFP49711 727 aaPredicted RBP25.73■■□□□ 1.71
HLA-C-202ENST00000376237 ACTR2P61160 394 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 HYIQ5T013 277 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 CDK5RAP3Q96JB5 506 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 HSD17B14Q9BPX1 270 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 BCAS3Q9H6U6 928 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 USP25Q9UHP3 1055 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 Q9Y3F1 56 aa25.73■■□□□ 1.71
HLA-C-202ENST00000376237 FOXN1O15353 648 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 ATG7O95352 703 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 P4HBP07237 508 aaKnown RBP25.72■■□□□ 1.71
HLA-C-202ENST00000376237 PSAPP07602 524 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 CACNB2Q08289 660 aaPredicted RBP25.72■■□□□ 1.71
HLA-C-202ENST00000376237 SNW1Q13573 536 aaKnown RBP25.72■■□□□ 1.71
HLA-C-202ENST00000376237 KLHL40Q2TBA0 621 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 MIS18BP1Q6P0N0 1132 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 FMR1NBQ8N0W7 255 aaPredicted RBP25.72■■□□□ 1.71
HLA-C-202ENST00000376237 SEPT1Q8WYJ6 367 aa25.72■■□□□ 1.71
HLA-C-202ENST00000376237 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.71■■□□□ 1.71
HLA-C-202ENST00000376237 POLR2DO15514 142 aaKnown RBP25.71■■□□□ 1.71
HLA-C-202ENST00000376237 ZNF202O95125 648 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 HSPA1AP0DMV8 641 aaKnown RBP25.71■■□□□ 1.71
HLA-C-202ENST00000376237 HSPA1BP0DMV9 641 aaKnown RBP25.71■■□□□ 1.71
HLA-C-202ENST00000376237 GRK4P32298 578 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 ARHGAP1Q07960 439 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 KARSQ15046 597 aaKnown RBP25.71■■□□□ 1.71
HLA-C-202ENST00000376237 RRAGBQ5VZM2 374 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 ABHD15Q6UXT9 468 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 CATSPER3Q86XQ3 398 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 IQUBQ8NA54 791 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 SPATA33Q96N06 139 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 PTPN22Q9Y2R2 807 aa25.71■■□□□ 1.71
HLA-C-202ENST00000376237 NOP56O00567 594 aaKnown RBP25.7■■□□□ 1.7
HLA-C-202ENST00000376237 DKC1O60832 514 aaKnown RBP eCLIP25.7■■□□□ 1.75e-8■■□□□ 14.4
HLA-C-202ENST00000376237 NR1I2O75469 434 aa25.7■■□□□ 1.7
HLA-C-202ENST00000376237 MAP3K21Q5TCX8 1036 aa25.7■■□□□ 1.7
HLA-C-202ENST00000376237 COPS5Q92905 334 aa25.7■■□□□ 1.7
HLA-C-202ENST00000376237 DACT1Q9NYF0 836 aa25.7■■□□□ 1.7
HLA-C-202ENST00000376237 GNEQ9Y223 722 aaKnown RBP25.7■■□□□ 1.7
HLA-C-202ENST00000376237 PTCH2Q9Y6C5 1203 aa25.7■■□□□ 1.7
HLA-C-202ENST00000376237 SEPT4O43236 478 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 TRAK2O60296 914 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 KINO60870 393 aaKnown RBP25.69■■□□□ 1.7
HLA-C-202ENST00000376237 SLITRK3O94933 977 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 SPATA31C1P0DKV0 1188 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 PRKAR2AP13861 404 aaKnown RBP25.69■■□□□ 1.7
HLA-C-202ENST00000376237 SP4Q02446 784 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 TMEM63BQ5T3F8 832 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 PDILTQ8N807 584 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 TRPV1Q8NER1 839 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 CCDC34Q96HJ3 373 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 TIGD1Q96MW7 591 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 PANK2Q9BZ23 570 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 CUEDC2Q9H467 287 aa25.69■■□□□ 1.7
HLA-C-202ENST00000376237 DDX19AQ9NUU7 478 aaKnown RBP25.69■■□□□ 1.7
HLA-C-202ENST00000376237 MED24O75448 989 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 SUPT20HL2P0C7V6 817 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 QARSP47897 775 aaKnown RBP25.68■■□□□ 1.7
HLA-C-202ENST00000376237 GRB10Q13322 594 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 ZRSR1Q15695 479 aaKnown RBP25.68■■□□□ 1.7
HLA-C-202ENST00000376237 HSDL1Q3SXM5 330 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 PPTC7Q8NI37 304 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 DYDC2Q96IM9 177 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 GPR20Q99678 358 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 ZSWIM4Q9H7M6 989 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 RGL1Q9NZL6 768 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 STK17AQ9UEE5 414 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 A0A087X0B3 334 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 SORBS3O60504 671 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 STAT6P42226 847 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 PSMC5P62195 406 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 TRIM32Q13049 653 aa25.68■■□□□ 1.7
HLA-C-202ENST00000376237 TMEM119Q4V9L6 283 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms