RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 RAP1GDS1P52306 607 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 UBE3CQ15386 1083 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 PDXDC1Q6P996 788 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 TBC1D1Q86TI0 1168 aaPredicted RBP10.59□□□□□ -0.71
SPEN-201ENST00000375759 ABCC10Q5T3U5 1492 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 hCG_1984214I3L0E3 225 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 ZNF713Q8N859 430 aaPredicted RBP10.59□□□□□ -0.71
SPEN-201ENST00000375759 EEF2KMTQ96G04 330 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 USP44Q9H0E7 712 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 NRBP2Q9NSY0 501 aa10.59□□□□□ -0.71
SPEN-201ENST00000375759 CFAP73A6NFT4 308 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 CDC37Q16543 378 aaPredicted RBP10.58□□□□□ -0.71
SPEN-201ENST00000375759 SESTD1Q86VW0 696 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 MYLK4Q86YV6 388 aaPredicted RBP10.58□□□□□ -0.71
SPEN-201ENST00000375759 MYO5CQ9NQX4 1742 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 USP40Q9NVE5 1235 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 SLC13A4Q9UKG4 626 aa10.58□□□□□ -0.71
SPEN-201ENST00000375759 CFLARO15519 480 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 FTCDO95954 541 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 CERKLQ49MI3 558 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 EPM2AIP1Q7L775 607 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 SDR42E1Q8WUS8 393 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 CFAP36Q96G28 342 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 MRFAP1Q9Y605 127 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 PYGLP06737 847 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 ZFXP17010 805 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 CCNYQ8ND76 341 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 WDR91A4D1P6 747 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 CCNL1Q9UK58 526 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 SMYD4Q8IYR2 804 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 RCOR1Q9UKL0 485 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 SYNJ2BP-COX16A0A087WUM0 186 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 DTNBO60941 627 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 TAC1P20366 129 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 PMLP29590 882 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 HDAC4P56524 1084 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 COX16Q9P0S2 106 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 PAMP19021 973 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 NEK2P51955 445 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 ICA1LQ8NDH6 482 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 DYDC2Q96IM9 177 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 TEX12Q9BXU0 123 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 GFPT2O94808 682 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPEN-201ENST00000375759 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 TAF1BQ53T94 588 aaPredicted RBP10.58□□□□□ -0.72
SPEN-201ENST00000375759 CALN1Q9BXU9 219 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 SUN2Q9UH99 717 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 ZFP69BQ9UJL9 534 aa10.58□□□□□ -0.72
SPEN-201ENST00000375759 MAP3K7CLP57077 242 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TSTA3Q13630 321 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 ALCAMQ13740 583 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 LARGE2Q8N3Y3 721 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 ELAC2Q9BQ52 826 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 SUGCTQ9HAC7 445 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 LRRC47Q8N1G4 583 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TRPC5Q9UL62 973 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 KRT4P19013 534 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 DLGAP5Q15398 846 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TRIM67Q6ZTA4 783 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 PAWRQ96IZ0 340 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 NACC1Q96RE7 527 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TMEM247A6NEH6 219 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 NPR1P16066 1061 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 GOLGA8FQ08AF8 430 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 GOLGA8DPQ0D2H9 430 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 LINC00301Q8NCQ3 95 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 OSBPL3Q9H4L5 887 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 E9PMD0 336 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 PPARGP37231 505 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 KIF19Q2TAC6 998 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 C1orf146Q5VVC0 180 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 ACAD11Q709F0 780 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 CPSF3Q9UKF6 684 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 MMP1P03956 469 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 STAT2P52630 851 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TMEM259Q4ZIN3 620 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 ZBTB38Q8NAP3 1195 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 EAF2Q96CJ1 260 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 EDC3Q96F86 508 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 PEG3Q9GZU2 1588 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 KIAA0556O60303 1618 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 A0A0G2JND7 137 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 DYNLT1P63172 113 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 SRPRBQ9Y5M8 271 aaKnown RBP10.57□□□□□ -0.72
SPEN-201ENST00000375759 GMNCA6NCL1 334 aa10.57□□□□□ -0.72
SPEN-201ENST00000375759 TOM1O60784 492 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms