RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.33□□□□□ -0.27
C9orf3-203ENST00000375315 PDS5AQ29RF7 1337 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 TACC1O75410 805 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 LUC7L3O95232 432 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 AKR1B1P15121 316 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 PRLRP16471 622 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 TCP1P17987 556 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 NTRK3Q16288 839 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 ZNHIT6Q9NWK9 470 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 C5orf60A6NFR6 353 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 MRPS25P82663 173 aaKnown RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 UBXN1Q04323 297 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 FKBP15Q5T1M5 1219 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 JDP2Q8WYK2 163 aa13.33□□□□□ -0.28
C9orf3-203ENST00000375315 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-203ENST00000375315 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 RTN3O95197 1032 aaPredicted RBP13.32□□□□□ -0.28
C9orf3-203ENST00000375315 CCT6BQ92526 530 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 DNAJC7Q99615 494 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 A0A1B0GUL6 1792 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 TTC26A0AVF1 554 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 FERP16591 822 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 CPLX4Q7Z7G2 160 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 GSDMAQ96QA5 445 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 LACRTQ9GZZ8 138 aa13.32□□□□□ -0.28
C9orf3-203ENST00000375315 CLTAP09496 248 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 TROAPQ12815 778 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 QPCTQ16769 361 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 HYOU1Q9Y4L1 999 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 CFAP73A6NFT4 308 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 GCOM1H8Y6P7 765 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 GSTA1P08263 222 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 MYZAPP0CAP1 466 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 AFMP43652 599 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 PAPOLAP51003 745 aaKnown RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 CWF19L1Q69YN2 538 aaKnown RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 WHAMMQ8TF30 809 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 TAOK3Q9H2K8 898 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 TMBIM4Q9HC24 238 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
C9orf3-203ENST00000375315 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-203ENST00000375315 KCNJ18B7U540 433 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 GRIN1Q05586 938 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CXCL9Q07325 125 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 BLMHQ13867 455 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 KCNJ12Q14500 433 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 DIS3L2Q8IYB7 885 aaKnown RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CCDC170Q8IYT3 715 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 IFT81Q8WYA0 676 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 GAKO14976 1311 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 EGFRP00533 1210 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 HLA-DOAP06340 250 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 TSC22D3Q99576 134 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CEP131Q9UPN4 1083 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ORC4O43929 436 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 SLC16A2P36021 539 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ROR2Q01974 943 aaKnown RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ODF2Q5BJF6 829 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 SMYD4Q8IYR2 804 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-203ENST00000375315 ANKS4BQ8N8V4 417 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 SUPT20HQ8NEM7 779 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
C9orf3-203ENST00000375315 UIMC1Q96RL1 719 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms