RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BUB1O43683 1085 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 MYL7Q01449 175 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 ARHGEF37A1IGU5 675 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SESN3P58005 492 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 KRT81Q14533 505 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SPDYCQ5MJ68 293 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 RSBN1LQ6PCB5 846 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 PSTPIP2Q9H939 334 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 DYTNA2CJ06 578 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 BACH1O14867 736 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SEC31AO94979 1220 aaKnown RBP10.98□□□□□ -0.65
PTCH1-204ENST00000375290 RXRAP19793 462 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 AP3B2Q13367 1082 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 PNMA1Q8ND90 353 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 ARMT1Q9H993 441 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SEPT3Q9UH03 358 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 PDE6AP16499 860 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 TFAP4Q01664 338 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 SESTD1Q86VW0 696 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 MGARPQ8TDB4 240 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 NACC1Q96RE7 527 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 ZC4H2Q9NQZ6 224 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
PTCH1-204ENST00000375290 IGSF1Q8N6C5 1336 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 MT-ND3P03897 115 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 PLTPP55058 493 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 TRIM72Q6ZMU5 477 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 APOEP02649 317 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 MDH1P40925 334 aaKnown RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 CTSWP56202 376 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 ZC3H18Q86VM9 953 aaKnown RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 TEKT3Q9BXF9 490 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 MAPK8IP1Q9UQF2 711 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 PLEKHG2Q9H7P9 1386 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 RASA3Q14644 834 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 KLC3Q6P597 504 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 PDZD8Q8NEN9 1154 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 TTC1Q99614 292 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 CCPG1Q9ULG6 757 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 O00370 1275 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 TNNC2P02585 160 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 KRT31Q15323 416 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 KRT4P19013 534 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 SLC1A1P43005 524 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 CYLC2Q14093 348 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 ITIH4Q14624 930 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 EPM2AIP1Q7L775 607 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 NYAP1Q6ZVC0 841 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 G2E3Q7L622 706 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 EIF1ADQ8N9N8 165 aaKnown RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-204ENST00000375290 A0A1B0GTH6 734 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 CA4P22748 312 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 POLE2P56282 527 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 ARL4CP56559 192 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 PPP1R2P1Q96PQ5 205 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 WWP1Q9H0M0 922 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 AZI2Q9H6S1 392 aa10.97□□□□□ -0.65
PTCH1-204ENST00000375290 RSPH10B2B2RC85 870 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 RSPH10BP0C881 870 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 MX2P20592 715 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 ATP6V0A1Q93050 837 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 BLZF1Q9H2G9 400 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 ZFP69BQ9UJL9 534 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 CAPN11Q9UMQ6 739 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 MAGI3Q5TCQ9 1506 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 IFNB1P01574 187 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 ABCB4P21439 1286 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 ZBTB8OSQ8IWT0 167 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 POLE3Q9NRF9 147 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 STRNO43815 780 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 CDK17Q00537 523 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 PDE1BQ01064 536 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 ALKBH5Q6P6C2 394 aaKnown RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 CYP26B1Q9NR63 512 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 GCNT4Q9P109 453 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 CFAP65Q6ZU64 1925 aaKnown RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 RPSAP08865 295 aaKnown RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 SGMS1Q86VZ5 419 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 BCORL1Q5H9F3 1711 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 A6NJR5 290 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 E9PMD0 336 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 PPARGP37231 505 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 NEK2P51955 445 aa10.96□□□□□ -0.65
PTCH1-204ENST00000375290 PDE1CQ14123 709 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-204ENST00000375290 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms