RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 EIF2AK1Q9BQI3 630 aaKnown RBP20.22■□□□□ 0.83
RXRB-202ENST00000374685 NHEJ1Q9H9Q4 299 aaPredicted RBP20.22■□□□□ 0.83
RXRB-202ENST00000374685 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.22■□□□□ 0.83
RXRB-202ENST00000374685 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 DUSP10Q9Y6W6 482 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
RXRB-202ENST00000374685 CCDC122Q5T0U0 273 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 ST7Q9NRC1 585 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 MACROD2A1Z1Q3 448 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 MAP3K9P80192 1104 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 MAN2A1Q16706 1144 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 DNAJC7Q99615 494 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 CCPG1Q9ULG6 757 aa20.22■□□□□ 0.83
RXRB-202ENST00000374685 TADA3O75528 432 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 IPO7O95373 1038 aaKnown RBP20.21■□□□□ 0.83
RXRB-202ENST00000374685 ARHGAP25P42331 645 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 LRRC63Q05C16 580 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 CACNA2D4Q7Z3S7 1137 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 SH2D3AQ9BRG2 576 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 FAM170AA1A519 330 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 CTAGE9A4FU28 777 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 MYBP10242 640 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 ALAS1P13196 640 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 FKBP3Q00688 224 aaKnown RBP20.21■□□□□ 0.83
RXRB-202ENST00000374685 EHHADHQ08426 723 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 Q4G0T1 1027 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 DYDC2Q96IM9 177 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 DEF6Q9H4E7 631 aa20.21■□□□□ 0.83
RXRB-202ENST00000374685 RNF216Q9NWF9 866 aaPredicted RBP20.21■□□□□ 0.83
RXRB-202ENST00000374685 FGFR1OPO95684 399 aaKnown RBP20.2■□□□□ 0.82
RXRB-202ENST00000374685 ARP10275 920 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 RPA1P27694 616 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 HERVK_113P62684 666 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 RASSF7Q02833 373 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 KCNA1Q09470 495 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 BMS1Q14692 1282 aaKnown RBP20.2■□□□□ 0.82
RXRB-202ENST00000374685 KSR1Q8IVT5 923 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 TTYH3Q9C0H2 523 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 HDAC6Q9UBN7 1215 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 COL4A3BPQ9Y5P4 624 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 NFIBO00712 420 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 GAS7O60861 476 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 ZBED6P86452 979 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 PSMD2Q13200 908 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 ADAM9Q13443 819 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 HOOK2Q96ED9 719 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 LACRTQ9GZZ8 138 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 VAV3Q9UKW4 847 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 RABGAP1Q9Y3P9 1069 aa20.2■□□□□ 0.82
RXRB-202ENST00000374685 RCCD1A6NED2 376 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 CLIC2O15247 247 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 GCNT3O95395 438 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 ASNSP08243 561 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 POLD1P28340 1107 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 EPS15P42566 896 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 GIT2Q14161 759 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 PLS1Q14651 629 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 AGBL3Q8NEM8 1001 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 CCDC42Q96M95 316 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 MBOAT7Q96N66 472 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 RAVER2Q9HCJ3 691 aaKnown RBP20.19■□□□□ 0.82
RXRB-202ENST00000374685 ZNF446Q9NWS9 450 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 ZNF646O15015 1829 aaPredicted RBP20.19■□□□□ 0.82
RXRB-202ENST00000374685 LRRC53A6NM62 1247 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 SEMA3FQ13275 785 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 MUM1L1Q5H9M0 696 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 HYIQ5T013 277 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 FAM20AQ96MK3 541 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 TRERF1Q96PN7 1200 aa20.19■□□□□ 0.82
RXRB-202ENST00000374685 TBCAO75347 108 aaKnown RBP20.18■□□□□ 0.82
RXRB-202ENST00000374685 SEC31AO94979 1220 aaKnown RBP20.18■□□□□ 0.82
RXRB-202ENST00000374685 NR2F2P24468 414 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 TCERG1LQ5VWI1 586 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 ZNF577Q9BSK1 485 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 NUP58Q9BVL2 599 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 GEMIN8Q9NWZ8 242 aaKnown RBP20.18■□□□□ 0.82
RXRB-202ENST00000374685 IGLV3-22A0A075B6J6 115 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 CLCN6P51797 869 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 PRKG1Q13976 671 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 TDRD12Q587J7 1177 aaKnown RBP20.18■□□□□ 0.82
RXRB-202ENST00000374685 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 ERGIC2Q96RQ1 377 aa20.18■□□□□ 0.82
RXRB-202ENST00000374685 MRPL11Q9Y3B7 192 aaKnown RBP20.18■□□□□ 0.82
RXRB-202ENST00000374685 SRGAP2O75044 1071 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 FLOT1O75955 427 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 FECHP22830 423 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 DCAF17Q5H9S7 520 aaPredicted RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 MICALL2Q8IY33 904 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 JAKMIP2Q96AA8 810 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 CAPZA3Q96KX2 299 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 PURBQ96QR8 312 aaKnown RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 NAPGQ99747 312 aaPredicted RBP20.17■□□□□ 0.82
RXRB-202ENST00000374685 SIK3Q9Y2K2 1263 aa20.17■□□□□ 0.82
RXRB-202ENST00000374685 PCDHA2Q9Y5H9 948 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms