RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 C15orf52Q6ZUT6 534 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 RELL1Q8IUW5 271 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 TMCO5AQ8N6Q1 288 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 USP6NLQ92738 828 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 DESI2Q9BSY9 194 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CRNKL1Q9BZJ0 848 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 EPC1Q9H2F5 836 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 MRPL44Q9H9J2 332 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 CABP5Q9NP86 173 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CARD8Q9Y2G2 431 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 LAD1O00515 517 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 MAP2K7O14733 419 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 NDUFB5O43674 189 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 ABL1P00519 1130 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CCNCP24863 283 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 KIF5BP33176 963 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 LONP1P36776 959 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 NR5A1Q13285 461 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 ORC2Q13416 577 aaPredicted RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 SEPT2Q15019 361 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CCBE1Q6UXH8 406 aaPredicted RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 DGKHQ86XP1 1220 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SUN5Q8TC36 379 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SH3TC2Q8TF17 1288 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SHISA4Q96DD7 197 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 ERP27Q96DN0 273 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 PAGE5Q96GU1 130 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 RPS6KC1Q96S38 1066 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 RMND1Q9NWS8 449 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SEPT10Q9P0V9 454 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 ADGRG1Q9Y653 693 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 GMEB1Q9Y692 573 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 NAV1Q8NEY1 1877 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 GOLGA6L10A0A0M3HER8 536 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 USP5P45974 858 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CTAG1AP78358 180 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 DYNC1I2Q13409 638 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 SPECC1Q5M775 1068 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 BICDL1Q6ZP65 573 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CCDC50Q8IVM0 306 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 MAGEF1Q9HAY2 307 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 SAMSN1Q9NSI8 373 aaKnown RBP9□□□□□ -0.97
GARNL3-201ENST00000373386 PCSK1NQ9UHG2 260 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 CDC23Q9UJX2 597 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 ACAD8Q9UKU7 415 aa9□□□□□ -0.97
GARNL3-201ENST00000373386 C10orf71Q711Q0 1435 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ATP9BO43861 1147 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 GNAQP50148 359 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 COX10Q12887 443 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 RASA2Q15283 850 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 MUM1Q2TAK8 710 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TTC38Q5R3I4 469 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 KAZNQ674X7 775 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 HDXQ7Z353 690 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 KIAA1958Q8N8K9 716 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 MSANTD4Q8NCY6 345 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 OXER1Q8TDS5 423 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 LZICQ8WZA0 190 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 PCDH18Q9HCL0 1135 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 AASDHPPTQ9NRN7 309 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 LIMA1Q9UHB6 759 aaKnown RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 RWDD2AQ9UIY3 292 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TTLL3Q9Y4R7 772 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 UBE2Q2LH0YL09 131 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 GTPBP6O43824 516 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TUBBP07437 444 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 SCG2P13521 617 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 PIK3CAP42336 1068 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 GRIN1Q05586 938 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ZNF827Q17R98 1081 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 CEP85LQ5SZL2 805 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 RASGRP2Q7LDG7 609 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 CNGA4Q8IV77 575 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 IGSF22Q8N9C0 903 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ZBTB8BQ8NAP8 495 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TRIM58Q8NG06 486 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ZNF384Q8TF68 577 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 EPSTI1Q96J88 318 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 CDHR1Q96JP9 859 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 MED15Q96RN5 788 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TSC22D3Q99576 134 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TANGO6Q9C0B7 1094 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ZCCHC17Q9NP64 241 aaKnown RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 DCP1AQ9NPI6 582 aaPredicted RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 MYO1AQ9UBC5 1043 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 DKK3Q9UBP4 350 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 ADD3Q9UEY8 706 aaKnown RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 RAB21Q9UL25 225 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TTF2Q9UNY4 1162 aaKnown RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 BZW2Q9Y6E2 419 aaKnown RBP8.99□□□□□ -0.97
GARNL3-201ENST00000373386 THSD7AQ9UPZ6 1657 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 TAF1LQ8IZX4 1826 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 EP400Q96L91 3159 aa8.99□□□□□ -0.97
GARNL3-201ENST00000373386 PPP1R3GB7ZBB8 358 aa8.98□□□□□ -0.97
GARNL3-201ENST00000373386 MFAP3LO75121 409 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms