RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 CNPY4Q8N129 248 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
CSMD2-203ENST00000373377 NEUROG2Q9H2A3 272 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 YY1AP1Q9H869 796 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 PANK4Q9NVE7 773 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 GRID2IPA4D2P6 1211 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 USP17L5A8MUK1 530 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 SERPING1P05155 500 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 SLC9A1P19634 815 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 PICALMQ13492 652 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 PNMA5Q96PV4 448 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 EYA3Q99504 573 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 LRRC4CQ9HCJ2 640 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.71□□□□□ -0.69
CSMD2-203ENST00000373377 GDF3Q9NR23 364 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 BCS1LQ9Y276 419 aa10.71□□□□□ -0.69
CSMD2-203ENST00000373377 SART1O43290 800 aaKnown RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 LDHBP07195 334 aaKnown RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 EPB41P11171 864 aaKnown RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 PRLRP16471 622 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 NF2P35240 595 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 PDE6BP35913 854 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 CDK17Q00537 523 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 PTK2Q05397 1052 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 ITGB3BPQ13352 177 aaPredicted RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 DDB1Q16531 1140 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 PARP10Q53GL7 1025 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 FIGNQ5HY92 759 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 FAM26FQ5R3K3 315 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 DAAM2Q86T65 1068 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 DGKHQ86XP1 1220 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 KSR1Q8IVT5 923 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 N4BP2L2Q92802 583 aaPredicted RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 AK8Q96MA6 479 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 TRIM51Q9BSJ1 452 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 TAF1DQ9H5J8 278 aaPredicted RBP10.71□□□□□ -0.7
CSMD2-203ENST00000373377 BAIAP2L1Q9UHR4 511 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 KIAA1024Q9UPX6 916 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 ATP6V0A2Q9Y487 856 aa10.71□□□□□ -0.7
CSMD2-203ENST00000373377 LOC102724428A0A0B4J2F2 783 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 MEIS1O00470 390 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 TTI1O43156 1089 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 CCDC172P0C7W6 258 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 SLC16A2P36021 539 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 SLCO1A2P46721 670 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 IFNAR2P48551 515 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 SIK1P57059 783 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 FKBP3Q00688 224 aaKnown RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 COASYQ13057 564 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 ADAM9Q13443 819 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 CDC37Q16543 378 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 ECM1Q16610 540 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 NBPF9Q3BBW0 867 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 C12orf60Q5U649 245 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 GJB7Q6PEY0 223 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 LRRC55Q6ZSA7 311 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 PEX26Q7Z412 305 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 USP38Q8NB14 1042 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 CUEDC2Q9H467 287 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 DDX20Q9UHI6 824 aaKnown RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 GMNCA6NCL1 334 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 RGL2O15211 777 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 PPP1R12BO60237 982 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 FAM107AO95990 144 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 RPS8P62241 208 aaKnown RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 NAB2Q15742 525 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 PNMA8AQ86V59 439 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 ZKSCAN4Q969J2 545 aaPredicted RBP10.7□□□□□ -0.7
CSMD2-203ENST00000373377 SH3GLB2Q9NR46 395 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 DUOX1Q9NRD9 1551 aa10.7□□□□□ -0.7
CSMD2-203ENST00000373377 HMGB1P1B2RPK0 211 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 M0R2N6 131 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 LAD1O00515 517 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 BUB1BO60566 1050 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 NOL4O94818 638 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 PCP11498 1178 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 SCP2P22307 547 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 FNTAP49354 379 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 ZNF211Q13398 564 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 GLE1Q53GS7 698 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 GUF1Q8N442 669 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 CNOT8Q9UFF9 292 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 ZNF804BA4D1E1 1349 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 F8W031 263 aaPredicted RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 STAT3P40763 770 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 MEI1Q5TIA1 1274 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 RNF10Q8N5U6 811 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 WHAMMQ8TF30 809 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 U2AF1L4Q8WU68 220 aaKnown RBP10.69□□□□□ -0.7
CSMD2-203ENST00000373377 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 RAD54LQ92698 747 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 RAB34Q9BZG1 259 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
CSMD2-203ENST00000373377 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms