RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 DZIP1Q86YF9 867 aaKnown RBP4.2□□□□□ -1.74
MCF2-202ENST00000370573 TRIM42Q8IWZ5 723 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 LILRB2Q8N423 598 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 IRF2BPLQ9H1B7 796 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 EPB41L4AQ9HCS5 686 aaPredicted RBP4.2□□□□□ -1.74
MCF2-202ENST00000370573 AATFQ9NY61 560 aaKnown RBP eCLIP4.2□□□□□ -1.74
MCF2-202ENST00000370573 ZNRF3Q9ULT6 936 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 RAXQ9Y2V3 346 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 PCDHAC2Q9Y5I4 1007 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 TACC3Q9Y6A5 838 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 LTBP3Q9NS15 1303 aa4.2□□□□□ -1.74
MCF2-202ENST00000370573 GPR75-ASB3A0A0A6YYF3 556 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 LDHCP07864 332 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CYP21A2P08686 494 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 FSTP19883 344 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CXCL9Q07325 125 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 ALX1Q15699 326 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 ADCK5Q3MIX3 580 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 KIAA0319Q5VV43 1072 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 TMED8Q6PL24 325 aaPredicted RBP4.19□□□□□ -1.74
MCF2-202ENST00000370573 KIAA0825Q8IV33 1275 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 IFNL3Q8IZI9 196 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SH3RF3Q8TEJ3 882 aaPredicted RBP4.19□□□□□ -1.74
MCF2-202ENST00000370573 SH3TC2Q8TF17 1288 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 FAM46AQ96IP4 442 aaKnown RBP4.19□□□□□ -1.74
MCF2-202ENST00000370573 MYRFLQ96LU7 910 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 DEPDC7Q96QD5 511 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 TTF2Q9UNY4 1162 aaKnown RBP4.19□□□□□ -1.74
MCF2-202ENST00000370573 FAN1Q9Y2M0 1017 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 DAGLAQ9Y4D2 1042 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SLC4A4Q9Y6R1 1079 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 MROH7-TTC4A0A0A0MT08 1334 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 GAKO14976 1311 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CCDC88AQ3V6T2 1871 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 MYH2Q9UKX2 1941 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SMIM22K7EJ46 135 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 DNAJC6O75061 913 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CTSBP07858 339 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CPA1P15085 419 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 MCCP23508 829 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 MAOBP27338 520 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 BTDP43251 543 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 RHBDL3P58872 404 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 GSTO1P78417 241 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 FBXL19Q6PCT2 694 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 STOX1Q6ZVD7 989 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 NIM1KQ8IY84 436 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 CELF2-AS1Q8N7Q2 184 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SDR42E1Q8WUS8 393 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 UBE2Q2Q8WVN8 375 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 MRIQ9BWK5 157 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SPC25Q9HBM1 224 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 FANCLQ9NW38 375 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 DDX56Q9NY93 547 aaKnown RBP4.19□□□□□ -1.74
MCF2-202ENST00000370573 MAST2Q6P0Q8 1798 aa4.19□□□□□ -1.74
MCF2-202ENST00000370573 SHTN1A0MZ66 631 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 FZD9O00144 591 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 GIPC1O14908 333 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 APPP05067 770 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 GNAT2P19087 354 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CRKP46108 304 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 HAND2P61296 217 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 GRM2Q14416 872 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 APOBEC3HQ6NTF7 200 aaKnown RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 HHIPL2Q6UWX4 724 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 BEND4Q6ZU67 534 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 C3orf58Q8NDZ4 430 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 C7orf69Q9H7B7 122 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 ABCB6Q9NP58 842 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 INCENPQ9NQS7 918 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 SIRPGQ9P1W8 387 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 PSME4Q14997 1843 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 ADAMTSL1Q8N6G6 1762 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CYP2D7A0A087X1C5 515 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 GAS2O43903 313 aaKnown RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 PEX14O75381 377 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CLSTN1O94985 981 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CYP2D6P10635 497 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 SOX9P48436 509 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 RABEP1Q15276 862 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 SGO2Q562F6 1265 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 ANKRD34AQ69YU3 496 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CIAPIN1Q6FI81 312 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CDC42EP5Q6NZY7 148 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CTR9Q6PD62 1173 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 FAM20CQ8IXL6 584 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 FAM169BQ8N8A8 192 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 GLIS3Q8NEA6 775 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 ZNF526Q8TF50 670 aaPredicted RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 ZNF296Q8WUU4 475 aaPredicted RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 JDP2Q8WYK2 163 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 JAKMIP1Q96N16 626 aaKnown RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 TMPRSS13Q9BYE2 586 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 TRIM55Q9BYV6 548 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 UPF3BQ9BZI7 483 aaKnown RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 CRNKL1Q9BZJ0 848 aaKnown RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 ZNF576Q9H609 170 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 DCP1AQ9NPI6 582 aaPredicted RBP4.18□□□□□ -1.74
MCF2-202ENST00000370573 GABBR1Q9UBS5 961 aa4.18□□□□□ -1.74
MCF2-202ENST00000370573 CTNNA3Q9UI47 895 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms