RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 KANSL2Q9H9L4 492 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 SARS2Q9NP81 518 aaKnown RBP13.57□□□□□ -0.24
TMEM56-201ENST00000370203 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 DBN1Q16643 649 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 PRAMEF18Q5VWM3 479 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 CYFIP1Q7L576 1253 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 ARHGAP24Q8N264 748 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 ZNF513Q8N8E2 541 aaPredicted RBP13.57□□□□□ -0.24
TMEM56-201ENST00000370203 PI4KBQ9UBF8 816 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 EFCAB8A8MWE9 144 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 PSMD2Q13200 908 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 AFG1LQ8WV93 481 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 NACC1Q96RE7 527 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 HEMGNQ9BXL5 484 aa13.57□□□□□ -0.24
TMEM56-201ENST00000370203 PZPP20742 1482 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 NCF2P19878 526 aaPredicted RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 TPX2Q9ULW0 747 aaKnown RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 PASKQ96RG2 1323 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 GSTA4O15217 222 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 CYP27A1Q02318 531 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 CDKL2Q92772 493 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 POTEMA6NI47 508 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 CREB3O43889 395 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 PRDX5P30044 214 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 RHPN2Q8IUC4 686 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 EMILIN3Q9NT22 766 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 MYOM2P54296 1465 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 ARL4AP40617 200 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 NUMBP49757 651 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 YWHAHQ04917 246 aaPredicted RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 NSUN7Q8NE18 718 aaKnown RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 CACTINQ8WUQ7 758 aaKnown RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 SYNDIG1Q9H7V2 258 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 H0YCG3 227 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 PFDN6O15212 129 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 PRPSAP2O60256 369 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 MAP7D3Q8IWC1 876 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 BHMT2Q9H2M3 363 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 SLC12A6Q9UHW9 1150 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 MCF2LO15068 1137 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 RPSAP08865 295 aaKnown RBP13.56□□□□□ -0.24
TMEM56-201ENST00000370203 RASSF2P50749 326 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 SLMAPQ14BN4 828 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 CAPS2Q9BXY5 557 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
TMEM56-201ENST00000370203 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PTPRTO14522 1441 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 SNRNP48Q6IEG0 339 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PPWD1Q96BP3 646 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 NEDD4P46934 1319 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 MOCS2O96007 188 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 KITP10721 976 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PLS3P13797 630 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 CHRNA5P30532 468 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 ZNF445P59923 1031 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 CDR2Q01850 454 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 C1orf228Q6PIY5 440 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 SH2B2O14492 632 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 GRAPQ13588 217 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 HS1BP3Q53T59 392 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 NGRNQ9NPE2 291 aaKnown RBP13.55□□□□□ -0.24
TMEM56-201ENST00000370203 KCNG1Q9UIX4 513 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 TRIM49BA6NDI0 452 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 USP17L10C9JJH3 530 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 MMP1P03956 469 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 CCDC38Q502W7 563 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 PIM2Q9P1W9 311 aa13.55□□□□□ -0.24
TMEM56-201ENST00000370203 TRPA1O75762 1119 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms