RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 IRX5P78411 483 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 ATP2C1P98194 919 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 SP4Q02446 784 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 MIS18BP1Q6P0N0 1132 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 B3GNT9Q6UX72 402 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 GLT1D1Q96MS3 346 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 MTG1Q9BT17 334 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
PRPF38B-202ENST00000370022 GSTTP1A0A1W2PQM5 241 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 CCNE2O96020 404 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 MYL3P08590 195 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 TXKP42681 527 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 TMEM266Q2M3C6 531 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 FOXD4L5Q5VV16 416 aaPredicted RBP17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 ARL6IP4Q66PJ3 421 aaKnown RBP17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 FOXD4L4Q8WXT5 416 aaPredicted RBP17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 GJA10Q969M2 543 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 UIMC1Q96RL1 719 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 KATNAL1Q9BW62 490 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 UNC45AQ9H3U1 944 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 VAV3Q9UKW4 847 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.39
PRPF38B-202ENST00000370022 EMSYQ7Z589 1322 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 PSAPP07602 524 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 COL6A1P12109 1028 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 SOX10P56693 466 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 FAM173BQ6P4H8 233 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 CXCL17Q6UXB2 119 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 ABHD15Q6UXT9 468 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 NECAB2Q7Z6G3 386 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 RAB34Q9BZG1 259 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 AZI2Q9H6S1 392 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 DISC1Q9NRI5 854 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 SAMM50Q9Y512 469 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 MORC2Q9Y6X9 1032 aaPredicted RBP17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 BRCA2P51587 3418 aa17.51■□□□□ 0.39
PRPF38B-202ENST00000370022 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 LGR5O75473 907 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 F2P00734 622 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 LGALS2P05162 132 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 SLC26A2P50443 739 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 FAM160B1Q5W0V3 765 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 C16orf70Q9BSU1 422 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 SMARCAD1Q9H4L7 1026 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
PRPF38B-202ENST00000370022 CHMP2AO43633 222 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 NASPP49321 788 aaPredicted RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 DTHD1Q6ZMT9 781 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 PLPPR4Q7Z2D5 763 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 UBE2Q1Q7Z7E8 422 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 AFAP1L1Q8TED9 768 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 PAWRQ96IZ0 340 aaKnown RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 USP28Q96RU2 1077 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 ERAP1Q9NZ08 941 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 TELO2Q9Y4R8 837 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 H3BRB1 525 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 STAT5BP51692 787 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 PDIA5Q14554 519 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 DIS3LQ8TF46 1054 aaKnown RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 GLG1Q92896 1179 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 SENP6Q9GZR1 1112 aaPredicted RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
PRPF38B-202ENST00000370022 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 A0A0U1RQG5 324 aaPredicted RBP17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 BACH1O14867 736 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 TECP42680 631 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 PTPAQ15257 358 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 EPHA7Q15375 998 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 C1orf53Q5VUE5 145 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 NCAPH2Q6IBW4 605 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 KAT2BQ92831 832 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 VTI1AQ96AJ9 217 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
PRPF38B-202ENST00000370022 HAS3O00219 553 aa17.47■□□□□ 0.39
PRPF38B-202ENST00000370022 DKC1O60832 514 aaKnown RBP eCLIP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms