RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■□□ 14.9
SYNCRIP-202ENST00000369622 EPN3Q9H201 632 aa17.53■□□□□ 0.4
SYNCRIP-202ENST00000369622 CUEDC2Q9H467 287 aa17.53■□□□□ 0.4
SYNCRIP-202ENST00000369622 PTPROQ16827 1216 aa17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 BZW1Q7L1Q6 419 aaKnown RBP17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 CREG2Q8IUH2 290 aa17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 SPATA4Q8NEY3 305 aa17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 ZIM3Q96PE6 472 aa17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 TSGA10Q9BZW7 698 aa17.52■□□□□ 0.4
SYNCRIP-202ENST00000369622 TRAF5O00463 557 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 SLC37A4O43826 429 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 OPA1O60313 960 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 HSF2BPO75031 334 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 CLTAP09496 248 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 PAFAH1B1P43034 410 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 PPP1R7Q15435 360 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 TMEM266Q2M3C6 531 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 PLAGL2Q9UPG8 496 aa17.52■□□□□ 0.39
SYNCRIP-202ENST00000369622 F8W031 263 aaPredicted RBP17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 RANBP1P43487 201 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 GRB10Q13322 594 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 OSBPL9Q96SU4 736 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 FAM170AA1A519 330 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 ANO9A1A5B4 782 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 PECAM1P16284 738 aaPredicted RBP17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 RAB27AP51159 221 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 PTGISQ16647 500 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 UBE2SQ16763 222 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 DAGLBQ8NCG7 672 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 DDX12PQ92771 950 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 ZNF287Q9HBT7 754 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 SALL4Q9UJQ4 1053 aa17.51■□□□□ 0.39
SYNCRIP-202ENST00000369622 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 TARSL2A2RTX5 802 aaKnown RBP17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 QPCTQ16769 361 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 KRT79Q5XKE5 535 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 NOD2Q9HC29 1040 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 BLOC1S4Q9NUP1 217 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 XIRP1Q702N8 1843 aaKnown RBP17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 PPP1R37O75864 691 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 SLC1A4P43007 532 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 GUCY2FP51841 1108 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 GSTO1P78417 241 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 SLC10A5Q5PT55 438 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 KCNK18Q7Z418 384 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 MYH10P35580 1976 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 LDHCP07864 332 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 MAN2A1Q16706 1144 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 CENPPQ6IPU0 288 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 CCDC43Q96MW1 224 aaKnown RBP17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 PACSIN2Q9UNF0 486 aaPredicted RBP17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 TRPC6Q9Y210 931 aa17.5■□□□□ 0.39
SYNCRIP-202ENST00000369622 TRAF1Q13077 416 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 MSL1Q68DK7 614 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 CCDC84Q86UT8 332 aaPredicted RBP17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 LZTS2Q9BRK4 669 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 MAGEF1Q9HAY2 307 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 FTCDO95954 541 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 C8orf74Q6P047 294 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 TRIM74Q86UV6 250 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 TRIM73Q86UV7 250 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 ZSCAN29Q8IWY8 852 aaPredicted RBP17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 CYFIP2Q96F07 1278 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 TSG101Q99816 390 aa17.49■□□□□ 0.39
SYNCRIP-202ENST00000369622 A0A1B0GVG6 124 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 ANP32DO95626 131 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 UNC13DQ70J99 1090 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 ZNF804AQ7Z570 1209 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 PNMA5Q96PV4 448 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 SPAG5Q96R06 1193 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 SIK3Q9Y2K2 1263 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 HYOU1Q9Y4L1 999 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 NR1D1P20393 614 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 SLC16A2P36021 539 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 SCTRP47872 440 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 POLR2FP61218 127 aaKnown RBP17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
SYNCRIP-202ENST00000369622 ZSCAN5CA6NGD5 496 aaPredicted RBP17.47■□□□□ 0.39
SYNCRIP-202ENST00000369622 DIAPH2O60879 1101 aa17.47■□□□□ 0.39
SYNCRIP-202ENST00000369622 UFL1O94874 794 aa17.47■□□□□ 0.39
SYNCRIP-202ENST00000369622 FGFR1OPO95684 399 aaKnown RBP17.47■□□□□ 0.39
SYNCRIP-202ENST00000369622 TMOD1P28289 359 aa17.47■□□□□ 0.39
SYNCRIP-202ENST00000369622 SLC8A1P32418 973 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms