RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 RAB21Q9UL25 225 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 TULP4Q9NRJ4 1543 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 RNF225M0QZC1 329 aaPredicted RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 CFLARO15519 480 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 RPS6KA5O75582 802 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 OVGP1Q12889 678 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 ACBD5Q5T8D3 534 aaPredicted RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 ZNF746Q6NUN9 644 aaPredicted RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 TTLL7Q6ZT98 887 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 BZW1Q7L1Q6 419 aaKnown RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 NBPF5PQ86XG9 351 aaPredicted RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 P2RX5Q93086 422 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 LRRC37BQ96QE4 947 aa8.37□□□□□ -1.07
UFL1-201ENST00000369278 MRPL46Q9H2W6 279 aaKnown RBP8.37□□□□□ -1.07
UFL1-201ENST00000369278 ECEL1O95672 775 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 SHBGP04278 402 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ATF7P17544 494 aaPredicted RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 KDSRQ06136 332 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 CYTH1Q15438 398 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 MIER3Q7Z3K6 550 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 CCDC110Q8TBZ0 833 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 BATF3Q9NR55 127 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 CD163L1Q9NR16 1453 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 LGALS16A8MUM7 142 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 SP4Q02446 784 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 CYP4A11Q02928 519 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 DNAJC3Q13217 504 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 POLA2Q14181 598 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ANKRD20A2Q5SQ80 823 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ANKRD20A1Q5TYW2 823 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ALKBH5Q6P6C2 394 aaKnown RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 RGS9BPQ6ZS82 235 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 TRAPPC11Q7Z392 1133 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 C4orf33Q8N1A6 199 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 TMTC2Q8N394 836 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 HSD3B7Q9H2F3 369 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 CUEDC2Q9H467 287 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 MARCOQ9UEW3 520 aaPredicted RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.36□□□□□ -1.07
UFL1-201ENST00000369278 ADGRB1O14514 1584 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 HECW2Q9P2P5 1572 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 PDCD2Q16342 344 aaPredicted RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 RNF220Q5VTB9 566 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 SPATA17Q96L03 361 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 PYM1Q9BRP8 204 aaKnown RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 ATP6V0A4Q9HBG4 840 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 SRPRBQ9Y5M8 271 aaKnown RBP8.36□□□□□ -1.07
UFL1-201ENST00000369278 PREX2Q70Z35 1606 aa8.36□□□□□ -1.07
UFL1-201ENST00000369278 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 CCDC195A0A1B0GUA6 201 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 DNM1LO00429 736 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 HARSP12081 509 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 BMP6P22004 513 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 PHKA1P46020 1223 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 KCNJ6P48051 423 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 MRPS9P82933 396 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 IL9RQ01113 521 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 SH2D4BQ5SQS7 431 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 GRAMD4Q6IC98 578 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 CYB5RLQ6IPT4 315 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 WDR93Q6P2C0 686 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 PDXDC1Q6P996 788 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 ARHGAP22Q7Z5H3 698 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 TTC17Q96AE7 1141 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 C9orf72Q96LT7 481 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 RWDD2AQ9UIY3 292 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 TUBE1Q9UJT0 475 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 RASA4BC9J798 803 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 CASQ2O14958 399 aaPredicted RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 ATP2A1O14983 1001 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 NVLO15381 856 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 RASA4O43374 803 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 PLCG1P19174 1290 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 HERVK_113P62684 666 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 ADAM9Q13443 819 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 SLC29A2Q14542 456 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 ARHGAP18Q8N392 663 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 SLC25A41Q8N5S1 370 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 UBL4BQ8N7F7 174 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 BICD1Q96G01 975 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 METTL22Q9BUU2 404 aaPredicted RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 TXLNGQ9NUQ3 528 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 STOML1Q9UBI4 398 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 PPARGC1AQ9UBK2 798 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
UFL1-201ENST00000369278 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 NOC2LQ9Y3T9 749 aaKnown RBP8.35□□□□□ -1.07
UFL1-201ENST00000369278 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms