RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CUL4BQ13620 913 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 NFIL3Q16649 462 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 CERKLQ49MI3 558 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 SYDE2Q5VT97 1194 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 ARHGEF18Q6ZSZ5 1173 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 TTC13Q8NBP0 860 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 FBXO41Q8TF61 875 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 BICD1Q96G01 975 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 CABS1Q96KC9 395 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 FAM204AQ9H8W3 233 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 PARVGQ9HBI0 331 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 KBTBD4Q9NVX7 518 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 RGPD8O14715 1765 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 PPP1R3GB7ZBB8 358 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 RGS16O15492 202 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 TRAPPC11Q7Z392 1133 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.94□□□□□ -1.144e-6■□□□□ 9.9
VTA1-202ENST00000367630 FRMD8Q9BZ67 464 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 BLZF1Q9H2G9 400 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 PDE11AQ9HCR9 933 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 SLIT2O94813 1529 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 H0YIN7 160 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 EXOC3O60645 756 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 MATR3P43243 847 aaKnown RBP eCLIP7.94□□□□□ -1.14
VTA1-202ENST00000367630 GNGT1P63211 74 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 NCAPHQ15003 741 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 MEA1Q16626 185 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 MIER3Q7Z3K6 550 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 C17orf53Q8N3J3 647 aaPredicted RBP7.94□□□□□ -1.14
VTA1-202ENST00000367630 AFAP1L2Q8N4X5 818 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 FNBP1Q96RU3 617 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 USP40Q9NVE5 1235 aa7.94□□□□□ -1.14
VTA1-202ENST00000367630 SOWAHDA6NJG2 315 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 GCNT3O95395 438 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 EYA4O95677 639 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 SARNPP82979 210 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 HADHQ16836 314 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 NCAPH2Q6IBW4 605 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 MYCT1Q8N699 235 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 VGLL2Q8N8G2 317 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 PPFIBP2Q8ND30 876 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TRIM9Q9C026 710 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TXLNGQ9NUQ3 528 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TRPC5Q9UL62 973 aaPredicted RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 SUN1O94901 812 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TECP42680 631 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 GYG1P46976 350 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 FAM186BQ8IYM0 893 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 CTTNBP2NLQ9P2B4 639 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 UVRAGQ9P2Y5 699 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 PLIN4Q96Q06 1357 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 MAST2Q6P0Q8 1798 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 POTEFA5A3E0 1075 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 ZC3H11AO75152 810 aaKnown RBP eCLIP7.93□□□□□ -1.14
VTA1-202ENST00000367630 POTEIP0CG38 1075 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 ICA1Q05084 483 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 ST3GAL1Q11201 340 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TBC1D9BQ66K14 1250 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 POTEEQ6S8J3 1075 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 CCDC197Q8NCU1 140 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 IPO4Q8TEX9 1081 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 CFAP57Q96MR6 1250 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 ANO3Q9BYT9 981 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 PRDM16Q9HAZ2 1276 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 SUCLA2Q9P2R7 463 aaPredicted RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 GPR75-ASB3A0A0A6YYF3 556 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 MAP7Q14244 749 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 FAM160B1Q5W0V3 765 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 FAM178BQ8IXR5 827 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TMEM47Q9BQJ4 181 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TAF1DQ9H5J8 278 aaPredicted RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 MID2Q9UJV3 735 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 PAPPAQ13219 1627 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 SPATA31A5Q5VU36 1347 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 SPATA31A7Q8IWB4 1347 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 MED7O43513 233 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TROVE2P10155 538 aaKnown RBP eCLIP7.93□□□□□ -1.14
VTA1-202ENST00000367630 HNRNPH3P31942 346 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 DCAF17Q5H9S7 520 aaPredicted RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 TOGARAM2Q6ZUX3 1019 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 NIPA1Q7RTP0 329 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 FAM167AQ96KS9 214 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 NT5C1BQ96P26 610 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 STXBP3O00186 592 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 MAFGO15525 162 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 NR2F2P24468 414 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TBXAS1P24557 533 aaPredicted RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 EIF4A3P38919 411 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 SLC18A3Q16572 532 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 BTNL9Q6UXG8 535 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 TRMT10CQ7L0Y3 403 aaKnown RBP7.93□□□□□ -1.14
VTA1-202ENST00000367630 SDR42E1Q8WUS8 393 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 IFT81Q8WYA0 676 aa7.93□□□□□ -1.14
VTA1-202ENST00000367630 CIB2O75838 187 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 HOXC6P09630 235 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PRCPP42785 496 aa7.92□□□□□ -1.14
VTA1-202ENST00000367630 PABPC4Q13310 644 aaKnown RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms