RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 STXBP3O00186 592 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 HEXIM1O94992 359 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 GSTA1P08263 222 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 GSTA2P09210 222 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MYCLP12524 364 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 CPA1P15085 419 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 SERPINB6P35237 376 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 LIFRP42702 1097 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 KCNJ6P48051 423 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MAGOHBQ96A72 148 aaKnown RBP9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ZNF653Q96CK0 615 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MTRQ99707 1265 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 EDEM3Q9BZQ6 932 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 TMEM60Q9H2L4 133 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 ITGB1BP2Q9UKP3 347 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 MAPK8IP1Q9UQF2 711 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 CARMIL3Q8ND23 1372 aa9.62□□□□□ -0.87
SYNE1-209ENST00000367257 CPS1P31327 1500 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CAPN9O14815 690 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 GGPS1O95749 300 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 FSCBQ5H9T9 825 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TPH2Q8IWU9 490 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 B4GALNT2Q8NHY0 566 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 ANKRD36BP1Q96IX9 119 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 RPS6KC1Q96S38 1066 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TFCP2L1Q9NZI6 479 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 SYNGAP1Q96PV0 1343 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 NCAPD2Q15021 1401 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TYW5A2RUC4 315 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 GNPATO15228 680 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 PRPF3O43395 683 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 KRT19P08727 400 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 IFNAR1P17181 557 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 RPS8P62241 208 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CASP8Q14790 479 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 PPP1R18Q6NYC8 613 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CC2D1AQ6P1N0 951 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 PDXDC1Q6P996 788 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 BLZF1Q9H2G9 400 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 KIAA1586Q9HCI6 787 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 BIN2Q9UBW5 565 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 SRPRBQ9Y5M8 271 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 IFNB1P01574 187 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TEX9Q8N6V9 391 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 AKAP12Q02952 1782 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 KLRF2D3W0D1 207 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CHEK2O96017 543 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CHGBP05060 677 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 PDE1BQ01064 536 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 DLGAP5Q15398 846 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 PSPC1Q8WXF1 523 aaKnown RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 SLC12A6Q9UHW9 1150 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 CCNL1Q9UK58 526 aaPredicted RBP9.61□□□□□ -0.87
SYNE1-209ENST00000367257 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
SYNE1-209ENST00000367257 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 BAG2O95816 211 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CPP00450 1065 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 GSPT1P15170 499 aaKnown RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 DDX5P17844 614 aaKnown RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 FAM133BQ5BKY9 247 aaKnown RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 NXNQ6DKJ4 435 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 SLC35F6Q8N357 371 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CATSPER1Q8NEC5 780 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CFBP00751 764 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 MT-ND3P03897 115 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 NR1D1P20393 614 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 NDUFA8P51970 172 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CENPUQ71F23 418 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 ARHGAP22Q7Z5H3 698 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 PLA2G4DQ86XP0 818 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 OTUD7AQ8TE49 926 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 GCOM2Q9BZD3 368 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 TAF5LO75529 589 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 KRT75O95678 551 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 MAPK4P31152 587 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CYP2J2P51589 502 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 SGO2Q562F6 1265 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 ODR4Q5SWX8 454 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 FAM102BQ5T8I3 360 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 SLFN12LQ6IEE8 588 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 USP44Q9H0E7 712 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 ALDH8A1Q9H2A2 487 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 TLK1Q9UKI8 766 aa9.6□□□□□ -0.87
SYNE1-209ENST00000367257 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
SYNE1-209ENST00000367257 CASP14P31944 242 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms