RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FLOT2Q14254 428 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 KRT40Q6A162 431 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 TRPM8Q7Z2W7 1104 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 MAD1L1Q9Y6D9 718 aa11.9□□□□□ -0.5
CDC42BPA-205ENST00000366769 CFAP69A5D8W1 941 aa11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 SYT2Q8N9I0 419 aaPredicted RBP11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 ALKBH8Q96BT7 664 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 MMS19Q96T76 1030 aa11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 NONOQ15233 471 aaKnown RBP eCLIP11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 GANCQ8TET4 914 aa11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCT7Q99832 543 aa11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.51
CDC42BPA-205ENST00000366769 TARSL2A2RTX5 802 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 HAUS5O94927 633 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 TEX13AQ9BXU3 409 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SEC24DO94855 1032 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 DR1Q01658 176 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PTH1RQ03431 593 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SCNN1BP51168 640 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 BHMT2Q9H2M3 363 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SCG2P13521 617 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 FOSL2P15408 326 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PITPNM3Q9BZ71 974 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 NEUROG2Q9H2A3 272 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 RNPEPQ9H4A4 650 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SLC52A1Q9NWF4 448 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ANAPC5Q9UJX4 755 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PFDN6O15212 129 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 EXOC3O60645 756 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PYGLP06737 847 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ITGB3BPQ13352 177 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 KRT33BQ14525 404 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 KRT31Q15323 416 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 HERC4Q5GLZ8 1057 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 RDH13Q8NBN7 331 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 C10orf88Q9H8K7 445 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PIK3C2GO75747 1445 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 CHN1P15882 459 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 MDH1P40925 334 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 TXKP42681 527 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 CYP2J2P51589 502 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 RPS6P62753 249 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ADALQ6DHV7 355 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ITFG2Q969R8 447 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SERPINB1P30740 379 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 COPB2P35606 906 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 KRT24Q2M2I5 525 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM193BQ96PV7 902 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 IPO11Q9UI26 975 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-205ENST00000366769 SNRPA1P09661 255 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 KITP10721 976 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 FBLN1P23142 703 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 GRK2P25098 689 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 RCN1Q15293 331 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 GOLPH3LQ9H4A5 285 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 NFKBIL1Q9UBC1 381 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 PNMA2Q9UL42 364 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 PCDHA13Q9Y5I0 950 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TTBK2Q6IQ55 1244 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 CCDC103Q8IW40 242 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 SRRM1Q8IYB3 904 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 FAM81BQ96LP2 452 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 SMARCAL1Q9NZC9 954 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 STAM2O75886 525 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 YWHAGP61981 247 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 STAT2P52630 851 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 FBXL5Q9UKA1 691 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TSPAN9O75954 239 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 KRT7P08729 469 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 RPS6KC1Q96S38 1066 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 CYP4F11Q9HBI6 524 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 MYO5CQ9NQX4 1742 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 ZNF185O15231 689 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 BCRP11274 1271 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 TULP2O00295 520 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 GSTT1P30711 240 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
CDC42BPA-205ENST00000366769 RFC5P40937 340 aa11.87□□□□□ -0.51
CDC42BPA-205ENST00000366769 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms