RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GSTCDQ8NEC7 633 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 ADAM7Q9H2U9 754 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 SFMBT1Q9UHJ3 866 aa6.84□□□□□ -1.31
RNU4-28P-201ENST00000364739 DDX3XO00571 662 aaKnown RBP eCLIP6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 CAP1Q01518 475 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 NT5DC1Q5TFE4 455 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 ABHD17CQ6PCB6 329 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 C16orf59Q7L2K0 433 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 CISD2Q8N5K1 135 aaKnown RBP6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 NCOA5Q9HCD5 579 aaKnown RBP6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 NTMQ9P121 344 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 CROTQ9UKG9 612 aa6.83□□□□□ -1.32
RNU4-28P-201ENST00000364739 A0A0G2JLL6 359 aaPredicted RBP6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 ESYT3A0FGR9 886 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 FAM90A27PA6NNH2 459 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 MAN2B1O00754 1011 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 WNT9AO14904 365 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 CKMP06732 381 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 FAHP16930 419 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 KCNA6P17658 529 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 GPR19Q15760 415 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 BTBD8Q5XKL5 378 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 TRIM39Q9HCM9 518 aa6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 NGRNQ9NPE2 291 aaKnown RBP6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 LUC7LQ9NQ29 371 aaKnown RBP6.82□□□□□ -1.32
RNU4-28P-201ENST00000364739 TCRBV16S1A1N1A0A5B0 115 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 EFCAB14O75071 495 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 RPL13P26373 211 aaKnown RBP6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 EPHA5P54756 1037 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 CRY1Q16526 586 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 TRIM61Q5EBN2 209 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 PRR31Q5SQ13 230 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 ZNF761Q86XN6 746 aaPredicted RBP6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 TTLL6Q8N841 843 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 DDX1Q92499 740 aaKnown RBP6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 RNPC3Q96LT9 517 aaKnown RBP6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 MRPL4Q9BYD3 311 aaKnown RBP6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 SMURF1Q9HCE7 757 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 RIC8BQ9NVN3 520 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 USP35Q9P2H5 1018 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 SRPK3Q9UPE1 567 aa6.81□□□□□ -1.32
RNU4-28P-201ENST00000364739 CCDC163A0A0D9SF12 145 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 ASMTLO95671 621 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 IL13P35225 146 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 GLRBP48167 497 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 PRAMEF18Q5VWM3 479 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 FSTL4Q6MZW2 842 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 TTLL11Q8NHH1 800 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 ADAMTS17Q8TE56 1095 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
RNU4-28P-201ENST00000364739 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 PLD2O14939 933 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 PTPN1P18031 435 aaKnown RBP6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 NAT1P18440 290 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 PFKPQ01813 784 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 SEC23AQ15436 765 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 FAM47CQ5HY64 1035 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 CD276Q5ZPR3 534 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 CPZQ66K79 652 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 VASNQ6EMK4 673 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 EP400NLQ6ZTU2 488 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 IGSF22Q8N9C0 903 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 CLIC6Q96NY7 704 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 SLC39A2Q9NP94 309 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 NUB1Q9Y5A7 615 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 DUSP10Q9Y6W6 482 aa6.79□□□□□ -1.32
RNU4-28P-201ENST00000364739 KCNQ2O43526 872 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 NOBOXO60393 691 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 SDSP20132 328 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 SKIDA1Q1XH10 827 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 RGL3Q3MIN7 710 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 TM4SF20Q53R12 229 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 OVCH1Q7RTY7 1134 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 TXNDC5Q8NBS9 432 aaKnown RBP6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 RELTQ969Z4 430 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 USP40Q9NVE5 1235 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 ATP23Q9Y6H3 246 aa6.78□□□□□ -1.32
RNU4-28P-201ENST00000364739 SCDO00767 359 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 GSTA4O15217 222 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 LACTBP83111 547 aaPredicted RBP6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZNF460Q14592 562 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 NLGN4XQ8N0W4 816 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 STPG3Q8N7X2 389 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 DTX3Q8N9I9 347 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 ZCCHC14Q8WYQ9 949 aaKnown RBP6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 TMEM260Q9NX78 707 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 JAG2Q9Y219 1238 aa6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 TNPO3Q9Y5L0 923 aaKnown RBP6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 MRPL42Q9Y6G3 142 aaKnown RBP6.77□□□□□ -1.33
RNU4-28P-201ENST00000364739 DNAJC8O75937 253 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms