RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
COL11A2-202ENST00000361917 RPSAP08865 295 aaKnown RBP16.07■□□□□ 0.16
COL11A2-202ENST00000361917 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
COL11A2-202ENST00000361917 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
COL11A2-202ENST00000361917 DHX9Q08211 1270 aaKnown RBP16.07■□□□□ 0.16
COL11A2-202ENST00000361917 IKBKBO14920 756 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 ANKRD20A4Q4UJ75 823 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 ANKRD20A8PQ5CZ79 823 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 ANKRD20A2Q5SQ80 823 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 ANKRD20A1Q5TYW2 823 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 HSPH1Q92598 858 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 LRRC4Q9HBW1 653 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 MYCP01106 439 aaPredicted RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SLC7A5Q01650 507 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 TLK1Q9UKI8 766 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 FAF1Q9UNN5 650 aaPredicted RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 GOLGA8QA0A0J9YX86 632 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 GOLGA8OA6NCC3 632 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 GOLGA8NF8WBI6 632 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 PRPSAP2O60256 369 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 MT-ND3P03897 115 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SPOPLQ6IQ16 392 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SIX6OS1Q8N1H7 587 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 OLA1Q9NTK5 396 aaKnown RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 LINC00301Q8NCQ3 95 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 OSBP2Q969R2 916 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 MRPL47Q9HD33 250 aaKnown RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 IRAK4Q9NWZ3 460 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 SERPING1P05155 500 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 PSAPP07602 524 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 PLS3P13797 630 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 PARVGQ9HBI0 331 aa16.06■□□□□ 0.16
COL11A2-202ENST00000361917 XAB2Q9HCS7 855 aaKnown RBP16.06■□□□□ 0.16
COL11A2-202ENST00000361917 LRRD1A4D1F6 860 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 CDO1Q16878 200 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 C10orf76Q5T2E6 689 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 ZSWIM5Q9P217 1185 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 EPS15L1Q9UBC2 864 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
COL11A2-202ENST00000361917 TRIM42Q8IWZ5 723 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
COL11A2-202ENST00000361917 FGD4Q96M96 766 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 DNAJC17Q9NVM6 304 aaKnown RBP16.05■□□□□ 0.16
COL11A2-202ENST00000361917 PEX19P40855 299 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 MECOMQ03112 1051 aa16.05■□□□□ 0.16
COL11A2-202ENST00000361917 PHLPP2Q6ZVD8 1323 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ZNF18P17022 549 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 CDR2Q01850 454 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 PBKQ96KB5 322 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 AIFM3Q96NN9 605 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ZNF233A6NK53 670 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 BNIP3LO60238 219 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 RSBN1LQ6PCB5 846 aaPredicted RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 EXOC8Q8IYI6 725 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 TCP11Q8WWU5 503 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ORC6Q9Y5N6 252 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 LUC7L3O95232 432 aaKnown RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 NCF2P19878 526 aaPredicted RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ANXA13P27216 316 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 MXI1P50539 228 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 INPP5FQ9Y2H2 1132 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 PPFIA2O75334 1257 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 EIF2AK2P19525 551 aaKnown RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 SOX5P35711 763 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 PCGF5Q86SE9 256 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
COL11A2-202ENST00000361917 ATP8B3O60423 1300 aa16.04■□□□□ 0.16
COL11A2-202ENST00000361917 LARGE1O95461 756 aa16.03■□□□□ 0.16
COL11A2-202ENST00000361917 RNF217Q8TC41 542 aa16.03■□□□□ 0.16
COL11A2-202ENST00000361917 EXT2Q93063 718 aa16.03■□□□□ 0.16
COL11A2-202ENST00000361917 RPF1Q9H9Y2 349 aaKnown RBP16.03■□□□□ 0.16
COL11A2-202ENST00000361917 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
COL11A2-202ENST00000361917 EVI5O60447 810 aa16.03■□□□□ 0.16
COL11A2-202ENST00000361917 NNTQ13423 1086 aa16.03■□□□□ 0.16
COL11A2-202ENST00000361917 PDCD7Q8N8D1 485 aaKnown RBP16.03■□□□□ 0.16
COL11A2-202ENST00000361917 PSPC1Q8WXF1 523 aaKnown RBP16.03■□□□□ 0.16
COL11A2-202ENST00000361917 FAM81BQ96LP2 452 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms