RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 ARMCX6Q7L4S7 300 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 SLFN12Q8IYM2 578 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 SLF1Q9BQI6 1058 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 PCDHB13Q9Y5F0 798 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 GOLGA6L7A0A1B0GV03 622 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 B4DLN1 442 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 PLA2G4BP0C869 781 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 IL17AQ16552 155 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
CALD1-202ENST00000361901 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 ATP2C2O75185 946 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 PPFIA4O75335 1185 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 CASP14P31944 242 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 SWT1Q5T5J6 900 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 PUF60Q9UHX1 559 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 G3BP2Q9UN86 482 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 CICQ96RK0 1608 aaPredicted RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 AKR1B10O60218 316 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 GCFC2P16383 781 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 JAG1P78504 1218 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 DPYDQ12882 1025 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 E2F5Q15329 346 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 NPY5RQ15761 445 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 MICALCLQ6ZW33 695 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 KRT26Q7Z3Y9 468 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 MYOCDQ8IZQ8 938 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 IRS2Q9Y4H2 1338 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 RHOXF2BP0C7M4 288 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 STK4Q13043 487 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 CAGE1Q8TC20 777 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 BICD1Q96G01 975 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 RHOXF2Q9BQY4 288 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 FHDC1Q9C0D6 1143 aaPredicted RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 CLIC2O15247 247 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 PPP1R11O60927 126 aaPredicted RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 COPB1P53618 953 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 RRP1BQ14684 758 aaKnown RBP10.09□□□□□ -0.79
CALD1-202ENST00000361901 FAM160B2Q86V87 743 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 RMDN3Q96TC7 470 aa10.09□□□□□ -0.79
CALD1-202ENST00000361901 MYH7P12883 1935 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 EFCAB8A8MWE9 144 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 KRT31Q15323 416 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 NLRX1Q86UT6 975 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 GUCA1BQ9UMX6 200 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 ENO4A6NNW6 628 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 CHUKO15111 745 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 H2AFXP16104 143 aaPredicted RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 BMP6P22004 513 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 RBL2Q08999 1139 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 SPA17Q15506 151 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 ATG4CQ96DT6 458 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 TRIM9Q9C026 710 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 FAM204AQ9H8W3 233 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 FEM1BQ9UK73 627 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 KDM3AQ9Y4C1 1321 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 KIF5CO60282 957 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 HARSP12081 509 aaKnown RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 ACTN3Q08043 901 aaPredicted RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 SMCR8Q8TEV9 937 aaPredicted RBP10.08□□□□□ -0.8
CALD1-202ENST00000361901 P2RX5Q93086 422 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 IMPACTQ9P2X3 320 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 TMX2Q9Y320 296 aa10.08□□□□□ -0.8
CALD1-202ENST00000361901 MYMKA6NI61 221 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 PRPF6O94906 941 aaKnown RBP10.07□□□□□ -0.8
CALD1-202ENST00000361901 CYP2J2P51589 502 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 AP3B2Q13367 1082 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 SEPT14Q6ZU15 432 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 DDX60Q8IY21 1712 aaKnown RBP10.07□□□□□ -0.8
CALD1-202ENST00000361901 NFKBIEO00221 500 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 NDUFAB1O14561 156 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 USP14P54578 494 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 ETF1P62495 437 aaKnown RBP10.07□□□□□ -0.8
CALD1-202ENST00000361901 RAPGEF1Q13905 1077 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 MCF2L2Q86YR7 1114 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 BCAS4Q8TDM0 211 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 TNFRSF25Q93038 417 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 MIEF2Q96C03 454 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 DYDC2Q96IM9 177 aa10.07□□□□□ -0.8
CALD1-202ENST00000361901 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms