RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CCNJLQ8IV13 435 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 LSM14AQ8ND56 463 aaKnown RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 MDM1Q8TC05 714 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 UBLCP1Q8WVY7 318 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 ABHD8Q96I13 439 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 TUBGCP5Q96RT8 1024 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 KRT12Q99456 494 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 IFIH1Q9BYX4 1025 aaKnown RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 R3HDM2Q9Y2K5 976 aaKnown RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 MYH13Q9UKX3 1938 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 ZNF609O15014 1411 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 MRC1P22897 1456 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 PTPRMP28827 1452 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 A0A1W2PQJ5 194 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 NEK2P51955 445 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 ADRM1Q16186 407 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 P3H1Q32P28 736 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 MAP7D1Q3KQU3 841 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 RNF43Q68DV7 783 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 THOC7Q6I9Y2 204 aaKnown RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 EAF2Q96CJ1 260 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 CCDC42Q96M95 316 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
CNOT4-203ENST00000361528 DPH5Q9H2P9 285 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 EXOC1Q9NV70 894 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
CNOT4-203ENST00000361528 HTR3EA5X5Y0 456 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 TRIM43BA6NCK2 446 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 TMEM110-MUSTN1A8MSY1 372 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 H7C1D1 291 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 MOCS3O95396 460 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 EEF1GP26641 437 aaKnown RBP12.59□□□□□ -0.39
CNOT4-203ENST00000361528 TRPC1P48995 793 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 ACADVLP49748 655 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 DNM2P50570 870 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 PDE1BQ01064 536 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 SPIDRQ14159 915 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 FIGNQ5HY92 759 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 CFAP157Q5JU67 520 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 SULT6B1Q6IMI4 303 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 ZNF507Q8TCN5 953 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
CNOT4-203ENST00000361528 TTYH3Q9C0H2 523 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 ETNK1Q9HBU6 452 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 DDX43Q9NXZ2 648 aaKnown RBP12.59□□□□□ -0.39
CNOT4-203ENST00000361528 CTNND2Q9UQB3 1225 aa12.59□□□□□ -0.39
CNOT4-203ENST00000361528 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
CNOT4-203ENST00000361528 PDS5AQ29RF7 1337 aaKnown RBP12.59□□□□□ -0.39
CNOT4-203ENST00000361528 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 RAD51CO43502 376 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 PABPC4LP0CB38 370 aaKnown RBP12.58□□□□□ -0.39
CNOT4-203ENST00000361528 PORP16435 677 aaPredicted RBP12.58□□□□□ -0.39
CNOT4-203ENST00000361528 CXCR5P32302 372 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 CDK7P50613 346 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 MTTPP55157 894 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.39
CNOT4-203ENST00000361528 PAK1Q13153 545 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 ACVR2BQ13705 512 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 EFCAB2Q5VUJ9 269 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 KRT40Q6A162 431 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 LRRC8CQ8TDW0 803 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 BHMTQ93088 406 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 NOX5Q96PH1 765 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 SETDB2Q96T68 719 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 ALG1Q9BT22 464 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.39
CNOT4-203ENST00000361528 EIF2AQ9BY44 585 aaKnown RBP12.58□□□□□ -0.39
CNOT4-203ENST00000361528 EPB41L1Q9H4G0 881 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 TMEM59LQ9UK28 342 aa12.58□□□□□ -0.39
CNOT4-203ENST00000361528 MYO5AQ9Y4I1 1855 aaKnown RBP12.58□□□□□ -0.4
CNOT4-203ENST00000361528 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 CCDC169A6NNP5 214 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 AGTP01019 485 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 NUDT17P0C025 328 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 FBLN1P23142 703 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 VARSP26640 1264 aaKnown RBP12.58□□□□□ -0.4
CNOT4-203ENST00000361528 HNRNPH3P31942 346 aaKnown RBP12.58□□□□□ -0.4
CNOT4-203ENST00000361528 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 NEXNQ0ZGT2 675 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 DPYDQ12882 1025 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 C3orf62Q6ZUJ4 267 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 ALDH16A1Q8IZ83 802 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
CNOT4-203ENST00000361528 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.4
CNOT4-203ENST00000361528 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 SEC31BQ9NQW1 1179 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
CNOT4-203ENST00000361528 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms